sig-7 (Caenorhabditis elegans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 F39H2.2 T42978_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
F39H2.2a RRM 243 313
F39H2.2b.1 RRM 174 244
F39H2.2b.2 RRM 174 244

Links

Other RRM family RBPs
Other Caenorhabditis elegans RBPs

164 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.000
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.000
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.000
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.000
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.000
AB09303.1 Alternaria brassicicola AB09303.1 N 0.000
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.000
ACR235W Ashbya gossypii ACR235W N 0.000
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.000
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.000
An16g01800 Aspergillus niger CADANGAG00012651 N 0.000
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.000
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.000
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.000
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.000
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.000
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.000
CHGG_08312 Chaetomium globosum CHGG_08312 N 0.000
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.000
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.000
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.000
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.000
CTRG_00938 Candida tropicalis CTRG_00938 N 0.000
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.000
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.000
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.000
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.000
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.000
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.000
estExt_fgenesh2_pm.C_60019 Thielavia terrestris estExt_fgenesh2_pm.C_60019 N 0.000
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.000
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.000
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.000
fgenesh1_pm.7_#_729 Myceliophthora thermophila fgenesh1_pm.7_#_729 N 0.000
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.000
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.000
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.000
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.000
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.000
FVEG_09726 Fusarium verticillioides FVEG_09726 N 0.000
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.000
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.000
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.000
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.000
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.000
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.000
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.000
MCYG_02010 Microsporum canis MCYG_02010 N 0.000
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.000
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.000
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.000
Pa_6_11740 Podospora anserina Pa_6_11740 N 0.000
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.000
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.000
PIN4 Candida albicans orf19.2534 N 0.000
PIN4 Saccharomyces cerevisiae YBL051C N 0.000
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.000
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.000
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.000
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.000
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.000
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.000
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.000
TERG_04408 Trichophyton rubrum TERG_04408 N 0.000
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.000
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.000
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.000
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.000
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.000