GJ18017 (Drosophila virilis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0205182 T44078_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0232434 RRM 244 313
FBpp0232434 RRM 342 412
FBpp0232434 RRM 508 567

Links

Other RRM family RBPs
Other Drosophila virilis RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005046 Aedes aegypti AAEL005046 N 0.871
AAH75146 Xenopus laevis AAH75146 N 0.716
AAH77813 Xenopus laevis AAH77813 N 0.706
AGAP008433 Anopheles gambiae AGAP008433 N 0.846
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.836
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.716
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.716
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.716
CG11266 Drosophila melanogaster FBgn0031883 N 0.945
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.866
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.866
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.866
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.866
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.771
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.716
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.736
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.791
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.940
GD23448 Drosophila simulans FBgn0194830 N 0.945
GE14328 Drosophila yakuba FBgn0231943 N 0.950
GF14957 Drosophila ananassae FBgn0091982 N 0.955
GG10454 Drosophila erecta FBgn0102763 N 0.955
GH13506 Drosophila grimshawi FBgn0120982 N 0.950
GI10246 Drosophila mojavensis FBgn0133011 N 0.980
GK15272 Drosophila willistoni FBgn0217277 N 0.950
GM16278 Drosophila sechellia FBgn0171194 N 0.945
PHUM394230 Pediculus humanus PHUM394230 N 0.796
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.716
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.716
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.716
RBM23 Oryzias latipes ENSORLG00000010370 N 0.716
RBM23 Oryzias latipes ENSORLG00000009919 N 0.716
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.716
RBM39 Equus caballus ENSECAG00000013423 N 0.716
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.716
RBM39 Canis familiaris ENSCAFG00000008327 N 0.716
RBM39 Homo sapiens ENSG00000131051 N 0.716
RBM39 Gallus gallus ENSGALG00000001550 N 0.716
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.716
Rbm39 Mus musculus ENSMUSG00000027620 N 0.716
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.711
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.716
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.701
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.716
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.716
RBM39 Sorex araneus ENSSARG00000007673 N 0.716
RBM39 Sus scrofa ENSSSCG00000007309 N 0.716
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.716
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.726
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.716
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.716
RBM39 Microcebus murinus ENSMICG00000001668 N 0.716
rbm39a Danio rerio ENSDARG00000011613 N 0.726
rbm39b Danio rerio ENSDARG00000041853 N 0.701