GE14328 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0231943 T44292_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0259338 RRM 235 304
FBpp0259338 RRM 333 403
FBpp0259338 RRM 502 558

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GG10454 Drosophila erecta FBgn0102763 N 0.995
GM16278 Drosophila sechellia FBgn0171194 N 0.985
GF14957 Drosophila ananassae FBgn0091982 N 0.985
CG11266 Drosophila melanogaster FBgn0031883 N 0.985
GD23448 Drosophila simulans FBgn0194830 N 0.985
GI10246 Drosophila mojavensis FBgn0133011 N 0.970
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.965
GK15272 Drosophila willistoni FBgn0217277 N 0.960
GJ18017 Drosophila virilis FBgn0205182 N 0.950
GH13506 Drosophila grimshawi FBgn0120982 N 0.940
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.889
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.889
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.889
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.889
AAEL005046 Aedes aegypti AAEL005046 N 0.871
AGAP008433 Anopheles gambiae AGAP008433 N 0.859
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.849
PHUM394230 Pediculus humanus PHUM394230 N 0.809
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.798
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.780
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.749
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.742
rbm39a Danio rerio ENSDARG00000011613 N 0.742
RBM39 Gallus gallus ENSGALG00000001550 N 0.742
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.742
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.739
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.739
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.739
RBM39 Sorex araneus ENSSARG00000007673 N 0.739
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.739
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.739
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.739
RBM39 Sus scrofa ENSSSCG00000007309 N 0.739
RBM39 Microcebus murinus ENSMICG00000001668 N 0.739
RBM39 Equus caballus ENSECAG00000013423 N 0.739
RBM39 Canis familiaris ENSCAFG00000008327 N 0.739
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.739
RBM39 Homo sapiens ENSG00000131051 N 0.739
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.739
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.739
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.739
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.739
Rbm39 Mus musculus ENSMUSG00000027620 N 0.739
RBM23 Oryzias latipes ENSORLG00000010370 N 0.737
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.737
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.732
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.732
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.731
AAH75146 Xenopus laevis AAH75146 N 0.729
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.729
RBM23 Oryzias latipes ENSORLG00000009919 N 0.727
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.724
AAH77813 Xenopus laevis AAH77813 N 0.719
rbm39b Danio rerio ENSDARG00000041853 N 0.712
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.704
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.700