GE18580 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0235987 T44321_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret
M110_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00114 		0.990
aret
M003_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00003 		0.990
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0263590 RRM 367 436
FBpp0263590 RRM 454 520
FBpp0263590 RRM 748 818

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH68729 Xenopus laevis AAH68729 N 0.000
AAH74235 Xenopus laevis AAH74235 N 0.000
Ame_R002220 Ailuropoda melanoleuca Ame_R002220 N 0.000
D3ZQ24_RAT Rattus norvegicus ENSRNOG00000029147 N 0.000
ENSACAG00000000494 Anolis carolinensis ENSACAG00000000494 N 0.000
ENSPPYG00000011285 Pongo pygmaeus ENSPPYG00000011285 N 0.000
Q3SZP6_BOVIN Bos taurus ENSBTAG00000034467 N 0.000
RBM11 Pan troglodytes ENSPTRG00000013786 N 0.000
RBM11 Pteropus vampyrus ENSPVAG00000013858 N 0.000
RBM11 Choloepus hoffmanni ENSCHOG00000007826 N 0.000
RBM11 Sorex araneus ENSSARG00000001717 N 0.000
RBM11 Sus scrofa ENSSSCG00000012005 N 0.000
RBM11 Spermophilus tridecemlineatus ENSSTOG00000013759 N 0.000
RBM11 Tarsius syrichta ENSTSYG00000003871 N 0.000
RBM11 Tursiops truncatus ENSTTRG00000007410 N 0.000
RBM11 Vicugna pacos ENSVPAG00000000673 N 0.000
rbm11 Xenopus tropicalis ENSXETG00000005847 N 0.000
RBM11 Canis familiaris ENSCAFG00000008013 N 0.000
Rbm11 Dipodomys ordii ENSDORG00000000801 N 0.000
RBM11 Procavia capensis ENSPCAG00000008368 N 0.000
RBM11 Felis catus ENSFCAG00000018199 N 0.000
RBM11 Homo sapiens ENSG00000185272 N 0.000
RBM11 Gorilla gorilla ENSGGOG00000025603 N 0.000
RBM11 Loxodonta africana ENSLAFG00000007082 N 0.000
RBM11 Macropus eugenii ENSMEUG00000003535 N 0.000
RBM11 Microcebus murinus ENSMICG00000004146 N 0.000
RBM11 Myotis lucifugus ENSMLUG00000005721 N 0.000
RBM11 Macaca mulatta ENSMMUG00000020089 N 0.000
Rbm11 Mus musculus ENSMUSG00000032940 N 0.000
RBM11 Ornithorhynchus anatinus ENSOANG00000008231 N 0.000
RBM11 Callithrix jacchus ENSCJAG00000003218 N 0.000
RBM11 Otolemur garnettii ENSOGAG00000005760 N 0.000
RBM11 Oryctolagus cuniculus ENSOCUG00000010409 N 0.000