GA25725-RB (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0247102 T44395_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret
M110_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00114 		0.971
aret
M003_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00003 		0.971
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0291898 RRM 365 434
FBpp0291898 RRM 452 518
FBpp0291898 RRM 735 805
FBpp0291899 RRM 142 211
FBpp0291899 RRM 229 296
FBpp0291899 RRM 512 582

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GF14192 Drosophila ananassae FBgn0091219 I 0.981
GD23828 Drosophila simulans FBgn0195198 I 0.976
GE18580 Drosophila yakuba FBgn0235987 I 0.976
GG23776 Drosophila erecta FBgn0115915 I 0.976
GM26763 Drosophila sechellia FBgn0181616 I 0.976
aret Drosophila melanogaster FBgn0000114 D 0.971
GK15493 Drosophila willistoni FBgn0217498 I 0.971
GJ17715 Drosophila virilis FBgn0204884 I 0.966
GH11642 Drosophila grimshawi FBgn0119122 I 0.962
GI17944 Drosophila mojavensis FBgn0140684 I 0.957
GL18624 Drosophila persimilis FBgn0156225 I 0.758
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.754
GH11645 Drosophila grimshawi FBgn0119125 I 0.754
GK15495 Drosophila willistoni FBgn0217500 I 0.754
GJ17718 Drosophila virilis FBgn0204887 I 0.749
e_gw1.172.82.1 Capitella teleta e_gw1.172.82.1 I 0.717