GE18580 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0235987 T44321_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret
M110_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00114 		0.990
aret
M003_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00003 		0.990
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0263590 RRM 367 436
FBpp0263590 RRM 454 520
FBpp0263590 RRM 748 818

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GM26763 Drosophila sechellia FBgn0181616 I 1.000
GD23828 Drosophila simulans FBgn0195198 I 1.000
GG23776 Drosophila erecta FBgn0115915 I 1.000
aret Drosophila melanogaster FBgn0000114 D 0.995
GK15493 Drosophila willistoni FBgn0217498 I 0.995
GF14192 Drosophila ananassae FBgn0091219 I 0.995
GJ17715 Drosophila virilis FBgn0204884 I 0.981
GA25725-RB Drosophila pseudoobscura FBgn0247102 I 0.976
GH11642 Drosophila grimshawi FBgn0119122 I 0.971
GI17944 Drosophila mojavensis FBgn0140684 I 0.966
GK15495 Drosophila willistoni FBgn0217500 I 0.754
GH11645 Drosophila grimshawi FBgn0119125 I 0.754
GL18624 Drosophila persimilis FBgn0156225 I 0.754
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.749
GJ17718 Drosophila virilis FBgn0204887 I 0.749
e_gw1.172.82.1 Capitella teleta e_gw1.172.82.1 I 0.708