GJ17718 (Drosophila virilis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0204887 T44076_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret
M110_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00114 		0.758
aret
M003_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00003 		0.758
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0232135 RRM 279 348
FBpp0232135 RRM 366 434
FBpp0232135 RRM 655 725

Links

Other RRM family RBPs
Other Drosophila virilis RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GK15495 Drosophila willistoni FBgn0217500 I 0.981
GH11645 Drosophila grimshawi FBgn0119125 I 0.971
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.962
GL18624 Drosophila persimilis FBgn0156225 I 0.962
GM26763 Drosophila sechellia FBgn0181616 I 0.749
GD23828 Drosophila simulans FBgn0195198 I 0.749
GJ17715 Drosophila virilis FBgn0204884 I 0.749
GG23776 Drosophila erecta FBgn0115915 I 0.749
GF14192 Drosophila ananassae FBgn0091219 I 0.749
GE18580 Drosophila yakuba FBgn0235987 I 0.749
GK15493 Drosophila willistoni FBgn0217498 I 0.749
aret Drosophila melanogaster FBgn0000114 D 0.749
GA25725-RB Drosophila pseudoobscura FBgn0247102 I 0.749
GH11642 Drosophila grimshawi FBgn0119122 I 0.744
GI17944 Drosophila mojavensis FBgn0140684 I 0.739
e_gw1.172.82.1 Capitella teleta e_gw1.172.82.1 I 0.735
e_gw1.31.79.1 Lottia gigantea e_gw1.31.79.1 N 0.724