GH11642 (Drosophila grimshawi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0119122 T43440_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret
M110_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00114 		0.962
aret
M003_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00003 		0.962
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0145548 RRM 373 442
FBpp0145548 RRM 460 526
FBpp0145548 RRM 750 820

Links

Other RRM family RBPs
Other Drosophila grimshawi RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GJ17715 Drosophila virilis FBgn0204884 I 0.990
GF14192 Drosophila ananassae FBgn0091219 I 0.976
GI17944 Drosophila mojavensis FBgn0140684 I 0.976
GE18580 Drosophila yakuba FBgn0235987 I 0.971
GG23776 Drosophila erecta FBgn0115915 I 0.971
GK15493 Drosophila willistoni FBgn0217498 I 0.971
GD23828 Drosophila simulans FBgn0195198 I 0.971
GM26763 Drosophila sechellia FBgn0181616 I 0.971
aret Drosophila melanogaster FBgn0000114 D 0.966
GA25725-RB Drosophila pseudoobscura FBgn0247102 I 0.962
GL18624 Drosophila persimilis FBgn0156225 I 0.754
GK15495 Drosophila willistoni FBgn0217500 I 0.749
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.749
GH11645 Drosophila grimshawi FBgn0119125 I 0.749
GJ17718 Drosophila virilis FBgn0204887 I 0.744
e_gw1.172.82.1 Capitella teleta e_gw1.172.82.1 I 0.703