GSVIVG00022010001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00022010001 T44703_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00022010001 RRM 46 116

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29726.m003960 Ricinus communis 29726.m003960 N 0.817
A9PDA2_POPTR Populus trichocarpa POPTR_0010s02700 N 0.746
B9HM84_POPTR Populus trichocarpa POPTR_0008s20120 N 0.746
BGIOSIBCE006342 Oryza indica BGIOSIBCE006342 N 0.704
BGIOSIBCE011211 Oryza indica BGIOSIBCE011211 N 0.761
BRADI1G61730 Brachypodium distachyon BRADI1G61730 N 0.718
BRADI4G03940 Brachypodium distachyon BRADI4G03940 N 0.704
cassava19116.valid.m1 Manihot esculenta cassava19116.valid.m1 N 0.831
cassava19117.valid.m1 Manihot esculenta cassava19117.valid.m1 N 0.831
chr4.LjT32J05.120.nc Lotus japonicus chr4.LjT32J05.120.nc N 0.859
Cucsa.253680 Cucumis sativus Cucsa.253680 N 0.887
Glyma07g38270.1 Glycine max Glyma07g38270.1 N 0.845
Glyma17g02470.1 Glycine max Glyma17g02470.1 N 0.845
LOC_Os02g15310 Oryza sativa LOC_Os02g15310 N 0.704
LOC_Os03g24890 Oryza sativa LOC_Os03g24890 N 0.761
MDP0000124152 Malus x domestica MDP0000124152 N 0.732
Medtr8g139830 Medicago truncatula Medtr8g139830 N 0.817
mgf013231m Mimulus guttatus mgf013231m N 0.789
PK03835.1 Cannabis sativa PK03835.1 N 0.817
ppa010343m Prunus persica ppa010343m N 0.873
ppa010360m Prunus persica ppa010360m N 0.873
SB01G034590 Sorghum bicolor Sb01g034590 N 0.732
SCL28 Arabidopsis thaliana AT5G18810-TAIR-G N 0.775