ISCW004858 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW004858 T44826_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG17838
M123_0.6 		Drosophila melanogaster BAAAUUD RNAcompete
Ray et al.(2013)
RNCMPT00131 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW004858-PA RRM 169 239
ISCW004858-PA RRM 250 317
ISCW004858-PA RRM 345 407

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
5166_YDR432W Saccharomyces mikatae 5166_YDR432W I 0.000
5461_YDR432W Saccharomyces bayanus 5461_YDR432W I 0.000
5654_YDR432W Saccharomyces paradoxus 5654_YDR432W I 0.000
A7TFW1_VANPO Vanderwaltozyma polyspora A7TFW1_VANPO I 0.000
ADR183C Ashbya gossypii ADR183C N 0.000
CAGL0H04763g Candida glabrata CAGL0H04763g I 0.000
KLTH0G04114g Kluyveromyces thermotolerans KLTH0G04114g I 0.000
Kwal_18572 Kluyveromyces waltii Kwal_18572 I 0.000
Npl3 Saccharomyces cerevisiae YDR432W D 0.000
SAKL0G05258g Lachancea kluyveri SAKL0G05258g I 0.000
Scas_Contig717.41 Saccharomyces castellii Scas_Contig717.41 I 0.000
ZYRO0D12892g Zygosaccharomyces rouxii ZYRO0D12892g I 0.000