ISCW004858 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW004858 T44826_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG17838
M123_0.6 		Drosophila melanogaster BAAAUUD RNAcompete
Ray et al.(2013)
RNCMPT00131 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW004858-PA RRM 169 239
ISCW004858-PA RRM 250 317
ISCW004858-PA RRM 345 407

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AGAP001419 Anopheles gambiae AGAP001419 I 0.802
amel4_ncbi_hmm4283 Apis mellifera amel4_ncbi_hmm4283 I 0.783
AAEL002879 Aedes aegypti AAEL002879 I 0.782
GH17270 Drosophila grimshawi FBgn0124740 I 0.782
CG17838 Drosophila melanogaster FBgn0038826 D 0.772
nasonia_NCBI_hmm256414 Nasonia vitripennis nasonia_NCBI_hmm256414 I 0.772
GA27045-RA Drosophila pseudoobscura FBgn0248416 I 0.762
PHUM268060 Pediculus humanus PHUM268060 I 0.754
GJ22950 Drosophila virilis FBgn0210053 I 0.752
GK22469 Drosophila willistoni FBgn0224446 I 0.752
GI10594 Drosophila mojavensis FBgn0133358 I 0.752
GE25686 Drosophila yakuba FBgn0242747 I 0.748
GG24121 Drosophila erecta FBgn0116260 I 0.748
GF16693 Drosophila ananassae FBgn0093714 I 0.748
GM23135 Drosophila sechellia FBgn0178003 I 0.748