estExt_fgenesh1_kg.C_chr_50164 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_kg.C_chr_50164 T50442_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_chr_50164 RRM 4 74

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02963.1 Alternaria brassicicola AB02963.1 N 0.803
ACLA_036560 Aspergillus clavatus CADACLAG00003885 N 0.761
AFLA_086540 Aspergillus flavus CADAFLAG00001433 N 0.761
AFUA_3G08580 Aspergillus fumigatus CADAFUAG00005852 N 0.775
An02g12270 Aspergillus niger CADANGAG00002750 N 0.746
ANIA_02989 Aspergillus nidulans CADANIAG00010091 N 0.718
AO090005001419 Aspergillus oryzae CADAORAG00003299 N 0.761
BDBG_01954 Blastomyces dermatitidis BDBG_01954 N 0.732
CIMG_07653 Coccidioides immitis CIMG_07653 N 0.718
CPSG_09452 Coccidioides posadasii CPSG_09452 N 0.718
EAT88191.2 Phaeosphaeria nodorum EAT88191.2 N 0.728
estExt_fgenesh5_pg.C_40456 Trichoderma reesei estExt_fgenesh5_pg.C_40456 N 0.789
estExt_Genewise1Plus.C_12858 Trichoderma atroviride estExt_Genewise1Plus.C_12858 N 0.803
estExt_Genewise1Plus.C_31070 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_31070 N 0.803
estExt_Genewise1Plus.C_70764 Mycosphaerella fijiensis estExt_Genewise1Plus.C_70764 N 0.901
FGSG_00442 Fusarium graminearum FGSG_00442 N 0.746
FOXG_00610 Fusarium oxysporum FOXG_00610 N 0.746
FVEG_00902 Fusarium verticillioides FVEG_00902 N 0.746
genemark.1698_g Thielavia terrestris genemark.1698_g N 0.732
GLRG_03991 Colletotrichum graminicola GLRG_03991 N 0.775
GSTUMT00008723001 Tuber melanosporum GSTUMT00008723001 N 0.732
gw1.2.3269.1 Myceliophthora thermophila gw1.2.3269.1 N 0.704
gw1.6.738.1 Cryphonectria parasitica gw1.6.738.1 N 0.704
gw1.9.437.1 Trichoderma virens gw1.9.437.1 N 0.732
MCYG_06115 Microsporum canis MCYG_06115 N 0.718
MGG_04816 Magnaporthe oryzae MGG_04816 N 0.722
MGYG_01973 Microsporum gypseum MGYG_01973 N 0.732
NFIA_068550 Neosartorya fischeri CADNFIAG00006348 N 0.775
PABG_01590 Paracoccidioides brasiliensis PABG_01590 N 0.746
Pa_1_13615 Podospora anserina Pa_1_13615 N 0.718
Pc06g01290 Penicillium chrysogenum Pc06g01290 N 0.718
PMAA_013050 Penicillium marneffei PMAA_013050 N 0.732
PTRG_07976 Pyrenophora tritici repentis PTRG_07976 N 0.817
SNOG_04431 Stagonospora nodorum SNOG_04431 N 0.831
TERG_04706 Trichophyton rubrum TERG_04706 N 0.732
TESG_06069 Trichophyton tonsurans TESG_06069 N 0.732
UREG_07630 Uncinocarpus reesii UREG_07630 N 0.746
VDAG_03252 Verticillium dahliae VDAG_03252 N 0.775