Pa_1_13615 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_1_13615 T57896_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_1_13615 RRM 4 74

Links

Other RRM family RBPs
Other Podospora anserina RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
genemark.1698_g Thielavia terrestris genemark.1698_g N 0.915
GLRG_03991 Colletotrichum graminicola GLRG_03991 N 0.887
FVEG_00902 Fusarium verticillioides FVEG_00902 N 0.873
FOXG_00610 Fusarium oxysporum FOXG_00610 N 0.873
FGSG_00442 Fusarium graminearum FGSG_00442 N 0.873
gw1.2.3269.1 Myceliophthora thermophila gw1.2.3269.1 N 0.859
estExt_fgenesh5_pg.C_40456 Trichoderma reesei estExt_fgenesh5_pg.C_40456 N 0.859
estExt_Genewise1Plus.C_12858 Trichoderma atroviride estExt_Genewise1Plus.C_12858 N 0.845
gw1.6.738.1 Cryphonectria parasitica gw1.6.738.1 N 0.845
CHGG_02784 Chaetomium globosum CHGG_02784 N 0.838
MGG_04816 Magnaporthe oryzae MGG_04816 N 0.833
gw1.9.437.1 Trichoderma virens gw1.9.437.1 N 0.817
VDAG_03252 Verticillium dahliae VDAG_03252 N 0.803
SNOG_04431 Stagonospora nodorum SNOG_04431 N 0.775
estExt_Genewise1Plus.C_31070 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_31070 N 0.761
PTRG_07976 Pyrenophora tritici repentis PTRG_07976 N 0.761
estExt_Genewise1Plus.C_70764 Mycosphaerella fijiensis estExt_Genewise1Plus.C_70764 N 0.746
AB02963.1 Alternaria brassicicola AB02963.1 N 0.746
fgenesh1_pg.sca_1_chr1_3_0000562 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000562 N 0.743
GSTUMT00008723001 Tuber melanosporum GSTUMT00008723001 N 0.718
Pc06g01290 Penicillium chrysogenum Pc06g01290 N 0.718
ACLA_036560 Aspergillus clavatus CADACLAG00003885 N 0.718
estExt_fgenesh1_kg.C_chr_50164 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_50164 N 0.718
NCU02736 Neurospora crassa NCU02736 N 0.704