estExt_fgenesh5_pg.C_40456 (Trichoderma reesei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh5_pg.C_40456 T51049_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh5_pg.C_40456 RRM 4 74

Links

Other RRM family RBPs
Other Trichoderma reesei RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_12858 Trichoderma atroviride estExt_Genewise1Plus.C_12858 N 0.972
FOXG_00610 Fusarium oxysporum FOXG_00610 N 0.930
FVEG_00902 Fusarium verticillioides FVEG_00902 N 0.930
gw1.9.437.1 Trichoderma virens gw1.9.437.1 N 0.930
FGSG_00442 Fusarium graminearum FGSG_00442 N 0.930
GLRG_03991 Colletotrichum graminicola GLRG_03991 N 0.915
genemark.1698_g Thielavia terrestris genemark.1698_g N 0.887
gw1.6.738.1 Cryphonectria parasitica gw1.6.738.1 N 0.859
VDAG_03252 Verticillium dahliae VDAG_03252 N 0.859
Pa_1_13615 Podospora anserina Pa_1_13615 N 0.859
gw1.2.3269.1 Myceliophthora thermophila gw1.2.3269.1 N 0.845
MGG_04816 Magnaporthe oryzae MGG_04816 N 0.819
estExt_Genewise1Plus.C_70764 Mycosphaerella fijiensis estExt_Genewise1Plus.C_70764 N 0.817
estExt_Genewise1Plus.C_31070 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_31070 N 0.817
CHGG_02784 Chaetomium globosum CHGG_02784 N 0.811
SNOG_04431 Stagonospora nodorum SNOG_04431 N 0.803
PTRG_07976 Pyrenophora tritici repentis PTRG_07976 N 0.803
fgenesh1_pg.sca_1_chr1_3_0000562 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000562 N 0.797
estExt_fgenesh1_kg.C_chr_50164 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_50164 N 0.789
AB02963.1 Alternaria brassicicola AB02963.1 N 0.789
GSTUMT00008723001 Tuber melanosporum GSTUMT00008723001 N 0.761
AFLA_086540 Aspergillus flavus CADAFLAG00001433 N 0.761
AO090005001419 Aspergillus oryzae CADAORAG00003299 N 0.761
BC1G_05706 Botrytis cinerea BC1G_05706 N 0.744
SS1G_02886 Sclerotinia sclerotiorum SS1G_02886 N 0.740
ACLA_036560 Aspergillus clavatus CADACLAG00003885 N 0.732
NCU02736 Neurospora crassa NCU02736 N 0.732
NFIA_068550 Neosartorya fischeri CADNFIAG00006348 N 0.718
AFUA_3G08580 Aspergillus fumigatus CADAFUAG00005852 N 0.718
CIMG_07653 Coccidioides immitis CIMG_07653 N 0.718
CPSG_09452 Coccidioides posadasii CPSG_09452 N 0.718
MGYG_01973 Microsporum gypseum MGYG_01973 N 0.718
Pc06g01290 Penicillium chrysogenum Pc06g01290 N 0.704
MCYG_06115 Microsporum canis MCYG_06115 N 0.704
EAT88191.2 Phaeosphaeria nodorum EAT88191.2 N 0.704