estExt_Genewise1Plus.C_320091 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_320091 T51449_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_320091 RRM 173 241
estExt_Genewise1Plus.C_320091 RRM 272 341
estExt_Genewise1Plus.C_320091 RRM 483 538

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_019550 Aspergillus clavatus CADACLAG00002508 N 0.782
AFLA_083600 Aspergillus flavus CADAFLAG00001140 N 0.772
AFUA_1G15810 Aspergillus fumigatus CADAFUAG00006904 N 0.792
An01g14180 Aspergillus niger CADANGAG00001415 N 0.777
ANIA_00917 Aspergillus nidulans CADANIAG00001739 N 0.756
AO090005001118 Aspergillus oryzae CADAORAG00003032 N 0.772
ARB_02131 Arthroderma benhamiae ARB_02131 N 0.792
ATEG_05213 Aspergillus terreus CADATEAG00005232 N 0.782
BC1G_00662 Botrytis cinerea BC1G_00662 N 0.787
BDBG_07521 Blastomyces dermatitidis BDBG_07521 N 0.782
CHGG_08209 Chaetomium globosum CHGG_08209 N 0.761
CIMG_03100 Coccidioides immitis CIMG_03100 N 0.787
CPSG_04315 Coccidioides posadasii CPSG_04315 N 0.787
estExt_fgenesh1_pg.C_70696 Myceliophthora thermophila estExt_fgenesh1_pg.C_70696 N 0.756
estExt_fgenesh2_pm.C_60094 Thielavia terrestris estExt_fgenesh2_pm.C_60094 N 0.761
estExt_fgenesh5_pg.C_10453 Trichoderma reesei estExt_fgenesh5_pg.C_10453 N 0.741
estExt_Genewise1Plus.C_100357 Neurospora tetrasperma estExt_Genewise1Plus.C_100357 N 0.782
estExt_Genewise1Plus.C_160212 Neurospora discreta estExt_Genewise1Plus.C_160212 N 0.782
estExt_Genewise1Plus.C_20716 Trichoderma virens estExt_Genewise1Plus.C_20716 N 0.741
estExt_Genewise1Plus.C_sca_3_chr4_2_00461 Nectria haematococca estExt_Genewise1Plus.C_sca_3_chr4_2_00461 N 0.746
e_gw1.00042.124.1 Aspergillus carbonarius e_gw1.00042.124.1 N 0.782
e_gw1.12.188.1 Trichoderma atroviride e_gw1.12.188.1 N 0.736
e_gw1.2.304.1 Mycosphaerella graminicola e_gw1.2.304.1 N 0.733
FGSG_05165 Fusarium graminearum FGSG_05165 N 0.751
FOXG_07909 Fusarium oxysporum FOXG_07909 N 0.751
FVEG_04832 Fusarium verticillioides FVEG_04832 N 0.751
GLRG_08678 Colletotrichum graminicola GLRG_08678 N 0.721
GSTUMT00004251001 Tuber melanosporum GSTUMT00004251001 N 0.777
HCAG_02257 Histoplasma capsulatum HCAG_02257 N 0.782
MCYG_00053 Microsporum canis MCYG_00053 N 0.787
MGYG_07158 Microsporum gypseum MGYG_07158 N 0.792
NFIA_009510 Neosartorya fischeri CADNFIAG00001864 N 0.792
PABG_06048 Paracoccidioides brasiliensis PABG_06048 N 0.782
Pad-1 Neurospora crassa NCU03491 N 0.782
Pa_6_4410 Podospora anserina Pa_6_4410 N 0.766
Pc16g14480 Penicillium chrysogenum Pc16g14480 N 0.751
PMAA_065980 Penicillium marneffei PMAA_065980 N 0.777
SS1G_00444 Sclerotinia sclerotiorum SS1G_00444 N 0.787
TEQG_08002 Trichophyton equinum TEQG_08002 N 0.792
TERG_08096 Trichophyton rubrum TERG_08096 N 0.787
TESG_03203 Trichophyton tonsurans TESG_03203 N 0.792
TRV_02070 Trichophyton verrucosum TRV_02070 N 0.792
UREG_02855 Uncinocarpus reesii UREG_02855 N 0.787
VDAG_07019 Verticillium dahliae VDAG_07019 N 0.736