CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_05213
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00005232
T33755_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00005232
RRM
180
248
IFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVAPAIQLTGQKLLGIPI
CADATEAP00005232
RRM
279
348
LYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRAIR
CADATEAP00005232
RRM
493
549
LEDDVRAECEDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQIT
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
45 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
An01g14180
Aspergillus niger
CADANGAG00001415
N
0.990
e_gw1.00042.124.1
Aspergillus carbonarius
e_gw1.00042.124.1
N
0.990
ACLA_019550
Aspergillus clavatus
CADACLAG00002508
N
0.985
NFIA_009510
Neosartorya fischeri
CADNFIAG00001864
N
0.980
AFLA_083600
Aspergillus flavus
CADAFLAG00001140
N
0.980
AO090005001118
Aspergillus oryzae
CADAORAG00003032
N
0.980
AFUA_1G15810
Aspergillus fumigatus
CADAFUAG00006904
N
0.980
ANIA_00917
Aspergillus nidulans
CADANIAG00001739
N
0.959
CIMG_03100
Coccidioides immitis
CIMG_03100
N
0.949
UREG_02855
Uncinocarpus reesii
UREG_02855
N
0.949
HCAG_02257
Histoplasma capsulatum
HCAG_02257
N
0.949
CPSG_04315
Coccidioides posadasii
CPSG_04315
N
0.949
BDBG_07521
Blastomyces dermatitidis
BDBG_07521
N
0.944
PMAA_065980
Penicillium marneffei
PMAA_065980
N
0.944
BC1G_00662
Botrytis cinerea
BC1G_00662
N
0.939
TERG_08096
Trichophyton rubrum
TERG_08096
N
0.939
PABG_06048
Paracoccidioides brasiliensis
PABG_06048
N
0.939
TEQG_08002
Trichophyton equinum
TEQG_08002
N
0.934
SS1G_00444
Sclerotinia sclerotiorum
SS1G_00444
N
0.934
ARB_02131
Arthroderma benhamiae
ARB_02131
N
0.934
TRV_02070
Trichophyton verrucosum
TRV_02070
N
0.934
TESG_03203
Trichophyton tonsurans
TESG_03203
N
0.934
MGYG_07158
Microsporum gypseum
MGYG_07158
N
0.934
MCYG_00053
Microsporum canis
MCYG_00053
N
0.929
GSTUMT00004251001
Tuber melanosporum
GSTUMT00004251001
N
0.893
estExt_Genewise1Plus.C_160212
Neurospora discreta
estExt_Genewise1Plus.C_160212
N
0.872
Pad-1
Neurospora crassa
NCU03491
N
0.872
estExt_Genewise1Plus.C_100357
Neurospora tetrasperma
estExt_Genewise1Plus.C_100357
N
0.872
Pa_6_4410
Podospora anserina
Pa_6_4410
N
0.867
CHGG_08209
Chaetomium globosum
CHGG_08209
N
0.867
estExt_fgenesh2_pm.C_60094
Thielavia terrestris
estExt_fgenesh2_pm.C_60094
N
0.862
estExt_fgenesh1_pg.C_70696
Myceliophthora thermophila
estExt_fgenesh1_pg.C_70696
N
0.862
Pc16g14480
Penicillium chrysogenum
Pc16g14480
N
0.862
FOXG_07909
Fusarium oxysporum
FOXG_07909
N
0.852
FVEG_04832
Fusarium verticillioides
FVEG_04832
N
0.852
estExt_Genewise1Plus.C_sca_3_chr4_2_00461
Nectria haematococca
estExt_Genewise1Plus.C_sca_3_chr4_2_00461
N
0.847
FGSG_05165
Fusarium graminearum
FGSG_05165
N
0.847
estExt_fgenesh5_pg.C_10453
Trichoderma reesei
estExt_fgenesh5_pg.C_10453
N
0.832
estExt_Genewise1Plus.C_20716
Trichoderma virens
estExt_Genewise1Plus.C_20716
N
0.832
VDAG_07019
Verticillium dahliae
VDAG_07019
N
0.832
e_gw1.12.188.1
Trichoderma atroviride
e_gw1.12.188.1
N
0.827
GLRG_08678
Colletotrichum graminicola
GLRG_08678
N
0.827
estExt_fgenesh1_pm.C_20497
Cryphonectria parasitica
estExt_fgenesh1_pm.C_20497
N
0.791
estExt_Genewise1Plus.C_320091
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_320091
N
0.782
MGG_12101
Magnaporthe oryzae
MGG_12101
N
0.755