PMAA_065980 (Penicillium marneffei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PMAA_065980 T58292_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_065980.t1 RRM 171 239
PMAA_065980.t1 RRM 270 339
PMAA_065980.t1 RRM 487 543

Links

Other RRM family RBPs
Other Penicillium marneffei RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TERG_08096 Trichophyton rubrum TERG_08096 N 0.954
PABG_06048 Paracoccidioides brasiliensis PABG_06048 N 0.954
ACLA_019550 Aspergillus clavatus CADACLAG00002508 N 0.954
TEQG_08002 Trichophyton equinum TEQG_08002 N 0.949
BDBG_07521 Blastomyces dermatitidis BDBG_07521 N 0.949
TESG_03203 Trichophyton tonsurans TESG_03203 N 0.949
TRV_02070 Trichophyton verrucosum TRV_02070 N 0.949
AO090005001118 Aspergillus oryzae CADAORAG00003032 N 0.949
ARB_02131 Arthroderma benhamiae ARB_02131 N 0.949
MGYG_07158 Microsporum gypseum MGYG_07158 N 0.949
AFLA_083600 Aspergillus flavus CADAFLAG00001140 N 0.949
An01g14180 Aspergillus niger CADANGAG00001415 N 0.944
ANIA_00917 Aspergillus nidulans CADANIAG00001739 N 0.944
MCYG_00053 Microsporum canis MCYG_00053 N 0.944
ATEG_05213 Aspergillus terreus CADATEAG00005232 N 0.944
CPSG_04315 Coccidioides posadasii CPSG_04315 N 0.944
CIMG_03100 Coccidioides immitis CIMG_03100 N 0.944
HCAG_02257 Histoplasma capsulatum HCAG_02257 N 0.944
BC1G_00662 Botrytis cinerea BC1G_00662 N 0.939
AFUA_1G15810 Aspergillus fumigatus CADAFUAG00006904 N 0.939
NFIA_009510 Neosartorya fischeri CADNFIAG00001864 N 0.939
UREG_02855 Uncinocarpus reesii UREG_02855 N 0.939
e_gw1.00042.124.1 Aspergillus carbonarius e_gw1.00042.124.1 N 0.939
SS1G_00444 Sclerotinia sclerotiorum SS1G_00444 N 0.939
GSTUMT00004251001 Tuber melanosporum GSTUMT00004251001 N 0.903
estExt_Genewise1Plus.C_160212 Neurospora discreta estExt_Genewise1Plus.C_160212 N 0.872
Pa_6_4410 Podospora anserina Pa_6_4410 N 0.872
estExt_Genewise1Plus.C_100357 Neurospora tetrasperma estExt_Genewise1Plus.C_100357 N 0.872
Pad-1 Neurospora crassa NCU03491 N 0.872
CHGG_08209 Chaetomium globosum CHGG_08209 N 0.867
estExt_fgenesh2_pm.C_60094 Thielavia terrestris estExt_fgenesh2_pm.C_60094 N 0.857
estExt_fgenesh1_pg.C_70696 Myceliophthora thermophila estExt_fgenesh1_pg.C_70696 N 0.857
estExt_fgenesh5_pg.C_10453 Trichoderma reesei estExt_fgenesh5_pg.C_10453 N 0.857
FOXG_07909 Fusarium oxysporum FOXG_07909 N 0.852
FVEG_04832 Fusarium verticillioides FVEG_04832 N 0.852
FGSG_05165 Fusarium graminearum FGSG_05165 N 0.847
estExt_Genewise1Plus.C_20716 Trichoderma virens estExt_Genewise1Plus.C_20716 N 0.847
estExt_Genewise1Plus.C_sca_3_chr4_2_00461 Nectria haematococca estExt_Genewise1Plus.C_sca_3_chr4_2_00461 N 0.847
VDAG_07019 Verticillium dahliae VDAG_07019 N 0.842
e_gw1.12.188.1 Trichoderma atroviride e_gw1.12.188.1 N 0.837
Pc16g14480 Penicillium chrysogenum Pc16g14480 N 0.832
GLRG_08678 Colletotrichum graminicola GLRG_08678 N 0.832
estExt_fgenesh1_pm.C_20497 Cryphonectria parasitica estExt_fgenesh1_pm.C_20497 N 0.781
estExt_Genewise1Plus.C_320091 Mycosphaerella fijiensis estExt_Genewise1Plus.C_320091 N 0.777
MGG_12101 Magnaporthe oryzae MGG_12101 N 0.750