gw1.1.1171.1 (Sporobolomyces roseus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.1.1171.1 T53048_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.1.1171.1 RRM 25 95

Links

Other RRM family RBPs
Other Sporobolomyces roseus RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29983.m003140 Ricinus communis 29983.m003140 N 0.000
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.000
B9MYE5_POPTR Populus trichocarpa POPTR_0017s04640 N 0.000
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.000
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.000
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.000
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.000
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.000
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.000
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.732
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.000
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.000
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.000
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.000
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.000
MDP0000315402 Malus x domestica MDP0000315402 N 0.000
mgf009822m Mimulus guttatus mgf009822m N 0.000
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.000
PK11911.1 Cannabis sativa PK11911.1 N 0.000
ppa010346m Prunus persica ppa010346m N 0.000
SB04G025800 Sorghum bicolor Sb04g025800 N 0.000
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.000