e_gw1.80.70.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.80.70.1 T50123_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.80.70.1 RRM 36 106

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf009822m Mimulus guttatus mgf009822m N 0.831
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.817
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.817
PK11911.1 Cannabis sativa PK11911.1 N 0.817
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.803
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.803
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.803
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.803
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.803
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.803
29983.m003140 Ricinus communis 29983.m003140 N 0.803
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.789
MDP0000315402 Malus x domestica MDP0000315402 N 0.789
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.789
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.789
ppa010346m Prunus persica ppa010346m N 0.789
SB04G025800 Sorghum bicolor Sb04g025800 N 0.775
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.775
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.775
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.775
mgf009384m Mimulus guttatus mgf009384m N 0.775
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.746
B9MYE5_POPTR Populus trichocarpa POPTR_0017s04640 N 0.746
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.746
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.746
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.746
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.746
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.746
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.746
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.732
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.732
NCU00210 Neurospora crassa NCU00210 N 0.732
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.732
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.732
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.732
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.732
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.732
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.732
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.718
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.718
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.718
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.718
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.718
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.718
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.718
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.718
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.718
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.718
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.718
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.718
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.718
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.718
An12g03930 Aspergillus niger CADANGAG00009835 N 0.718
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.718
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.704
PHUM535920 Pediculus humanus PHUM535920 N 0.704
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.704
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.704
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.704
MCYG_04468 Microsporum canis MCYG_04468 N 0.704
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.704
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.704
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.704
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.704
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.704
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.704
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.704
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.704
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.704
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.704
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.704
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.704
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.704
TERG_03424 Trichophyton rubrum TERG_03424 N 0.704
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.704
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.704
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.704