mgf009822m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf009822m T53672_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf009822m RRM 36 106

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf009384m Mimulus guttatus mgf009384m N 0.930
PK11911.1 Cannabis sativa PK11911.1 N 0.901
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.887
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.887
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.887
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.887
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.873
MDP0000315402 Malus x domestica MDP0000315402 N 0.873
ppa010346m Prunus persica ppa010346m N 0.873
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.873
SB04G025800 Sorghum bicolor Sb04g025800 N 0.859
29983.m003140 Ricinus communis 29983.m003140 N 0.859
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.859
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.859
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.859
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.859
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.859
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.845
B9MYE5_POPTR Populus trichocarpa POPTR_0017s04640 N 0.831
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.831
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.831
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.831
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.746
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.746
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.704
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.704
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.704
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.704
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.704
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.704
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.704
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.704
NCBP2 Equus caballus ENSECAG00000016153 N 0.704
NCBP2 Homo sapiens ENSG00000114503 N 0.704
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.704
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.704
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.704
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.704
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.704
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.704
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.704
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.704
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.704
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.704
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.704
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.704
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.704
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.704
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.704
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.704
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.704