GRMZM2G070113 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G070113 T54076_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G070113_P01 RRM 8 64
GRMZM2G070113_P01 RRM 111 172
GRMZM2G070113_P01 RRM 260 326
GRMZM2G070113_P01 RRM 370 436
GRMZM2G070113_P02 RRM 8 64
GRMZM2G070113_P02 RRM 111 172
GRMZM2G070113_P02 RRM 259 325
GRMZM2G070113_P02 RRM 369 435
GRMZM2G070113_P03 RRM 8 65
GRMZM2G070113_P03 RRM 112 174
GRMZM2G070113_P04 RRM 8 65

Links

Other RRM family RBPs
Other Zea mays RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29863.m001059 Ricinus communis 29863.m001059 N 0.721
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.718
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.887
BRADI2G56120 Brachypodium distachyon BRADI2G56120 N 0.781
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.727
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.723
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.723
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.723
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.723
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.728
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.718
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.703
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.937
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.728
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.721
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.853
mgf010164m Mimulus guttatus mgf010164m N 0.713
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.720
PK14373.1 Cannabis sativa PK14373.1 N 0.749
ppa005775m Prunus persica ppa005775m N 0.772
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.728
SB09G021560 Sorghum bicolor Sb09g021560 N 0.965