BRADI2G24150 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI2G24150 T33188_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G24150.1 RRM 8 68
BRADI2G24150.1 RRM 112 172
BRADI2G24150.1 RRM 259 325
BRADI2G24150.1 RRM 369 435

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB09G021560 Sorghum bicolor Sb09g021560 N 0.902
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.896
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.887
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.883
BRADI2G56120 Brachypodium distachyon BRADI2G56120 N 0.781
PK14373.1 Cannabis sativa PK14373.1 N 0.750
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.744
ppa005775m Prunus persica ppa005775m N 0.742
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.735
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.735
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.733
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.732
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.732
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.731
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.731
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.731
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.731
29863.m001059 Ricinus communis 29863.m001059 N 0.729
mgf010164m Mimulus guttatus mgf010164m N 0.725
Medtr1g124970 Medicago truncatula Medtr1g124970 N 0.719
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.719
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.718
XM_002893897.1 Arabidopsis lyrata Al_scaffold_0001_3801 N 0.715
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.710
B9GT89_POPTR Populus trichocarpa POPTR_0002s06660 N 0.703
chr5.CM0052.230.nd Lotus japonicus chr5.CM0052.230.nd N 0.701