chr4.CM0173.30.nd (Lotus japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 chr4.CM0173.30.nd T55878_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0173.30.nd RRM 122 192
chr4.CM0173.30.nd RRM 223 293

Links

Other RRM family RBPs
Other Lotus japonicus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30147.m013835 Ricinus communis 30147.m013835 N 0.711
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.711
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.711
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.704
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.782
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.782
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.711
PK05280.1 Cannabis sativa PK05280.1 N 0.704