Zrsr2 (Rattus norvegicus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSRNOG00000033176 T00616_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000049816 CCCH ZF 167 193
ENSRNOP00000049816 RRM 242 298
ENSRNOP00000049816 CCCH ZF 307 332

Links

Other CCCH ZF,RRM family RBPs
Other Rattus norvegicus RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009099 Ailuropoda melanoleuca Ame_R009099 I 0.000
RBM42 Anolis carolinensis ENSACAG00000005495 I 0.000
XM_002884402.1 Arabidopsis lyrata fgenesh2_kg.3__407__AT3G04500.1 I 0.000
AT3G04500 Arabidopsis thaliana AT3G04500-TAIR-G I 0.000
RBM42_BOVIN Bos taurus ENSBTAG00000013440 I 0.000
BRADI3G12840 Brachypodium distachyon BRADI3G12840 I 0.000
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.000
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.000
RBM42 Callithrix jacchus ENSCJAG00000010220 I 0.000
RBM42 Canis familiaris ENSCAFG00000006925 I 0.000
PK16312.1 Cannabis sativa PK16312.1 I 0.000
RBM42 Cavia porcellus ENSCPOG00000012365 I 0.000
Cucsa.178480 Cucumis sativus Cucsa.178480 I 0.000
rbm42 Danio rerio ENSDARG00000039910 I 0.000
LOC100051102 Equus caballus ENSECAG00000018215 I 0.000
RBM42 Erinaceus europaeus ENSEEUG00000004841 I 0.000
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.000
Glyma10g30900.1 Glycine max Glyma10g30900.1 I 0.000
Glyma20g36570.1 Glycine max Glyma20g36570.1 I 0.000
Glyma11g01300.1 Glycine max Glyma11g01300.1 I 0.000
RBM42 Gorilla gorilla ENSGGOG00000009972 I 0.000
76581 Helobdella robusta 76581 I 0.000
RBM42 Homo sapiens ENSG00000126254 D 0.000
chr5.LjT18P14.100.nd Lotus japonicus chr5.LjT18P14.100.nd N 0.000
LjSGA_021949.1 Lotus japonicus LjSGA_021949.1 I 0.000
RBM42 Macaca mulatta ENSMMUG00000018954 I 0.000
ENSMEUG00000016300 Macropus eugenii ENSMEUG00000016300 I 0.000
MDP0000320908 Malus x domestica MDP0000320908 I 0.000
MDP0000283678 Malus x domestica MDP0000283678 I 0.000
cassava22670.valid.m1 Manihot esculenta cassava22670.valid.m1 N 0.000
cassava22669.valid.m1 Manihot esculenta cassava22669.valid.m1 I 0.000
Medtr1g093610 Medicago truncatula Medtr1g093610 I 0.000
RBM42 Microcebus murinus ENSMICG00000009880 I 0.000
mgf021739m Mimulus guttatus mgf021739m I 0.000
mgf018525m Mimulus guttatus mgf018525m I 0.000
mgf008981m Mimulus guttatus mgf008981m I 0.000
RBM42 Monodelphis domestica ENSMODG00000013957 I 0.000
Rbm42 Mus musculus ENSMUSG00000036733 I 0.000
RBM42 Myotis lucifugus ENSMLUG00000011334 I 0.000
NCLIV_021850 Neospora caninum NCLIV_021850 N 0.000
RBM42 Ochotona princeps ENSOPRG00000001229 I 0.000
RBM42 Oryctolagus cuniculus ENSOCUG00000003337 I 0.000
BGIOSIBCE007866 Oryza indica BGIOSIBCE007866 I 0.000
BGIOSIBCE028936 Oryza indica BGIOSIBCE028936 I 0.000
LOC_Os02g40900 Oryza sativa LOC_Os02g40900 I 0.000
LOC_Os08g45240 Oryza sativa LOC_Os08g45240 I 0.000
RBM42 Oryzias latipes ENSORLG00000003387 I 0.000
RBM42 Otolemur garnettii ENSOGAG00000004144 I 0.000
RBM42 Pan troglodytes ENSPTRG00000010852 I 0.000
GSPATP00035306001 Paramecium tetraurelia GSPATP00035306001 N 0.000
PDK_20s1323974g003 Phoenix dactylifera PDK_20s1323974g003 I 0.000
PDK_20s1301681g005 Phoenix dactylifera PDK_20s1301681g005 I 0.000
PDK_20s1329112g001 Phoenix dactylifera PDK_20s1329112g001 N 0.000
e_gw1.156.67.1 Physcomitrella patens e_gw1.156.67.1 I 0.000
ENSPPYG00000009871 Pongo pygmaeus ENSPPYG00000009871 I 0.000
B9IPA5_POPTR Populus trichocarpa POPTR_0019s03570 I 0.000
B9I5N8_POPTR Populus trichocarpa POPTR_0013s04390 I 0.000
RBM42 Procavia capensis ENSPCAG00000013053 I 0.000
ppa010477m Prunus persica ppa010477m I 0.000
RBM42 Pteropus vampyrus ENSPVAG00000012815 I 0.000
Rbm42 Rattus norvegicus ENSRNOG00000024278 I 0.000
29680.m001693 Ricinus communis 29680.m001693 I 0.000
gw1.0.1780.1 Selaginella moellendorfii gw1.0.1780.1 I 0.000
RBM42 Sorex araneus ENSSARG00000010724 I 0.000
SB04G026430 Sorghum bicolor Sb04g026430 I 0.000
Sb02g038420 Sorghum bicolor Sb02g038420 I 0.000
RBM42 Spermophilus tridecemlineatus ENSSTOG00000013050 I 0.000
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.000
RBM42 Sus scrofa ENSSSCG00000002905 I 0.000
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.000
RBM42 Tarsius syrichta ENSTSYG00000014688 I 0.000
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.000
TGVEG_046310 Toxoplasma gondii TGVEG_046310 N 0.000
TGME49_003080 Toxoplasma gondii TGME49_003080 N 0.000
TGGT1_017860 Toxoplasma gondii TGGT1_017860 N 0.000
GSVIVG00016104001 Vitis vinifera GSVIVG00016104001 I 0.000
GSVIVG00023509001 Vitis vinifera GSVIVG00023509001 I 0.000
A2VDB3 Xenopus laevis A2VDB3 I 0.000
AAI29698 Xenopus laevis AAI29698 I 0.000
ENSXETG00000017599 Xenopus tropicalis ENSXETG00000017599 D 0.000
GRMZM2G125529 Zea mays GRMZM2G125529 I 0.000
GRMZM2G068255 Zea mays GRMZM2G068255 I 0.000