CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKRN3
(
Macaca mulatta
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMMUG00000007879
T02923_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000010347
CCCH ZF
96
121
TKQIICRYYIHGQCKEGENCRYSHDL
ENSMMUP00000010347
CCCH ZF
244
264
CYYASRGVCFRGESCMFLHGD
ENSMMUP00000010347
CCCH ZF
397
422
NKACRYFAEGRGNCPFGDTCFYKHEY
Links
Other
CCCH ZF
family RBPs
Other
Macaca mulatta
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R014340
Ailuropoda melanoleuca
Ame_R014340
N
0.727
MKRN3
Callithrix jacchus
ENSCJAG00000022162
N
0.973
MKRN3
Cavia porcellus
ENSCPOG00000003604
N
0.740
MKRN3
Choloepus hoffmanni
ENSCHOG00000004895
N
0.714
MKRN3
Felis catus
ENSFCAG00000009688
N
0.727
Q6J9M4_9PRIM
Gorilla gorilla
ENSGGOG00000013279
N
0.986
MKRN3
Homo sapiens
ENSG00000179455
N
0.986
Mkrn3
Mus musculus
ENSMUSG00000070527
N
0.701
MKRN3
Oryctolagus cuniculus
ENSOCUG00000012822
N
0.744
Q6J9M5_PANTR
Pan troglodytes
ENSPTRG00000006823
N
0.986
ENSPPYG00000006266
Pongo pygmaeus
ENSPPYG00000006266
N
0.973
Mkrn3
Rattus norvegicus
ENSRNOG00000010172
N
0.701
MKRN3
Spermophilus tridecemlineatus
ENSSTOG00000006095
N
0.709
MKRN3
Tarsius syrichta
ENSTSYG00000009002
N
0.744