Unk (Mus musculus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSMUSG00000020770 T02986_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000021116 CCCH ZF 90 112
ENSMUSP00000021116 CCCH ZF 294 320
ENSMUSP00000102060 CCCH ZF 90 112
ENSMUSP00000102060 CCCH ZF 294 320

Links

Other CCCH ZF family RBPs
Other Mus musculus RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL012456 Aedes aegypti AAEL012456 N 0.820
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.980
UNK Anolis carolinensis ENSACAG00000007303 N 0.920
AGAP000684 Anopheles gambiae AGAP000684 N 0.784
UNKL Bos taurus ENSBTAG00000014126 N 0.769
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.960
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.760
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.960
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.769
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.960
UNK Cavia porcellus ENSCPOG00000012679 N 0.960
UNKL Cavia porcellus ENSCPOG00000011846 N 0.843
unk Danio rerio ENSDARG00000000935 N 0.820
UNKL Danio rerio ENSDARG00000037838 N 0.804
Unk Dipodomys ordii ENSDORG00000008133 N 0.960
UNK Equus caballus ENSECAG00000024672 N 0.960
LOC100067623 Equus caballus ENSECAG00000010641 N 0.769
UNK Felis catus ENSFCAG00000005757 N 0.922
UNKL Gallus gallus ENSGALG00000006450 N 0.804
UNK Gallus gallus ENSGALG00000002278 N 0.920
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.865
UNK Gorilla gorilla ENSGGOG00000009203 N 0.960
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.788
188708 Helobdella robusta 188708 N 0.700
UNKL Homo sapiens ENSG00000059145 N 0.788
UNK Homo sapiens ENSG00000132478 N 0.960
ISCW001613 Ixodes scapularis ISCW001613 N 0.700
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.800
UNK Loxodonta africana ENSLAFG00000022662 N 0.960
UNKL Loxodonta africana ENSLAFG00000018262 N 0.824
UNK Macaca mulatta ENSMMUG00000013646 N 0.960
UNK Macropus eugenii ENSMEUG00000004094 N 0.940
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.804
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.920
UNKL Monodelphis domestica ENSMODG00000016188 N 0.824
UNK Monodelphis domestica ENSMODG00000007684 N 0.940
Unkl Mus musculus ENSMUSG00000015127 N 0.860
UNK Myotis lucifugus ENSMLUG00000015453 N 0.980
UNK Ochotona princeps ENSOPRG00000012784 N 0.880
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.760
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.960
UNKL Oryzias latipes ENSORLG00000005070 N 0.804
UNK Pan troglodytes ENSPTRG00000009656 N 0.960
PHUM219250 Pediculus humanus PHUM219250 N 0.860
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.808
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.960
UNK Procavia capensis ENSPCAG00000004504 N 0.980
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.960
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.980
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.863
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.960
UNK Sus scrofa ENSSSCG00000017201 N 0.960
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.920
UNK Takifugu rubripes ENSTRUG00000007192 N 0.920
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.804
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.784
UNK Tursiops truncatus ENSTTRG00000015890 N 0.940
AAH46725 Xenopus laevis AAH46725 N 0.900
unk Xenopus tropicalis ENSXETG00000012578 N 0.880