CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Glyma10g05550.1
(
Glycine max
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
Glyma10g05550.1
T05427_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Glyma10g05550.1
CCCH ZF
90
115
PKSILCEFFKVGQCAKGFKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Glycine max
RBPs
124 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIBMGA005962
Bombyx mori
BGIBMGA005962
N
0.000
GI18620
Drosophila mojavensis
FBgn0141359
N
0.000
GD11258
Drosophila simulans
FBgn0183008
N
0.000
Q8CIQ0_RAT
Rattus norvegicus
ENSRNOG00000014076
N
0.000