PMAA_051450 (Penicillium marneffei)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PMAA_051450 T06493_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_051450.t1 CCCH ZF 80 99
PMAA_051450.t1 CCCH ZF 127 149
PMAA_051450.t1 CCCH ZF 152 178
PMAA_051450.t1 CCCH ZF 182 205
PMAA_051450.t1 CCCH ZF 206 225

Links

Other CCCH ZF family RBPs
Other Penicillium marneffei RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_00210 Arthroderma benhamiae ARB_00210 N 0.702
gw1.00129.565.1 Aspergillus carbonarius gw1.00129.565.1 N 0.758
ACLA_031620 Aspergillus clavatus CADACLAG00003000 N 0.725
AFLA_080640 Aspergillus flavus CADAFLAG00000846 N 0.795
AFUA_1G02810 Aspergillus fumigatus CADAFUAG00008733 N 0.742
ANIA_00298 Aspergillus nidulans CADANIAG00002417 N 0.773
An01g05350 Aspergillus niger CADANGAG00000527 N 0.775
AO090005000813 Aspergillus oryzae CADAORAG00002768 N 0.795
ATEG_01945 Aspergillus terreus CADATEAG00008580 N 0.775
BDBG_04496 Blastomyces dermatitidis BDBG_04496 N 0.746
CIMG_04751 Coccidioides immitis CIMG_04751 N 0.791
CPSG_07754 Coccidioides posadasii CPSG_07754 N 0.783
HCAG_04743 Histoplasma capsulatum HCAG_04743 N 0.746
MCYG_05740 Microsporum canis MCYG_05740 N 0.702
MGYG_02843 Microsporum gypseum MGYG_02843 N 0.702
NFIA_021820 Neosartorya fischeri CADNFIAG00001277 N 0.750
PABG_06223 Paracoccidioides brasiliensis PABG_06223 N 0.763
Pc22g25210 Penicillium chrysogenum Pc22g25210 N 0.750
TEQG_00763 Trichophyton equinum TEQG_00763 N 0.702
TERG_06924 Trichophyton rubrum TERG_06924 N 0.702
TRV_05203 Trichophyton verrucosum TRV_05203 N 0.702
UREG_06760 Uncinocarpus reesii UREG_06760 N 0.809