CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CIMG_04751
(
Coccidioides immitis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CIMG_04751
T01294_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_04751T0
CCCH ZF
41
61
SDVPVCKAYREGHCPLGPMCP
CIMG_04751T0
CCCH ZF
87
109
LVCKHYLKGLCKKGIKCEYLHEY
CIMG_04751T0
CCCH ZF
112
138
RRMPECQSFARSGYCANGDDCLYQHVS
CIMG_04751T0
CCCH ZF
142
165
KLPPCEHYDKGFCPLGPLCAKKHV
CIMG_04751T0
CCCH ZF
166
185
RRKICPFYLAGFCPEGRACT
Links
Other
CCCH ZF
family RBPs
Other
Coccidioides immitis
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_07754
Coccidioides posadasii
CPSG_07754
N
0.983
UREG_06760
Uncinocarpus reesii
UREG_06760
N
0.939
PABG_06223
Paracoccidioides brasiliensis
PABG_06223
N
0.864
BDBG_04496
Blastomyces dermatitidis
BDBG_04496
N
0.864
HCAG_04743
Histoplasma capsulatum
HCAG_04743
N
0.839
ATEG_01945
Aspergillus terreus
CADATEAG00008580
N
0.792
PMAA_051450
Penicillium marneffei
PMAA_051450
N
0.791
AO090005000813
Aspergillus oryzae
CADAORAG00002768
N
0.780
AFLA_080640
Aspergillus flavus
CADAFLAG00000846
N
0.780
MCYG_05740
Microsporum canis
MCYG_05740
N
0.777
ACLA_031620
Aspergillus clavatus
CADACLAG00003000
N
0.775
TEQG_00763
Trichophyton equinum
TEQG_00763
N
0.769
MGYG_02843
Microsporum gypseum
MGYG_02843
N
0.769
ARB_00210
Arthroderma benhamiae
ARB_00210
N
0.769
TRV_05203
Trichophyton verrucosum
TRV_05203
N
0.769
TERG_06924
Trichophyton rubrum
TERG_06924
N
0.769
An01g05350
Aspergillus niger
CADANGAG00000527
N
0.767
ANIA_00298
Aspergillus nidulans
CADANIAG00002417
N
0.767
Pc22g25210
Penicillium chrysogenum
Pc22g25210
N
0.767
NFIA_021820
Neosartorya fischeri
CADNFIAG00001277
N
0.767
gw1.00129.565.1
Aspergillus carbonarius
gw1.00129.565.1
N
0.758
AFUA_1G02810
Aspergillus fumigatus
CADAFUAG00008733
N
0.758
TESG_04667
Trichophyton tonsurans
TESG_04667
N
0.711