CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFLA_080640
(
Aspergillus flavus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADAFLAG00000846
T02034_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFLAP00000846
CCCH ZF
43
62
DVPVCKAYSEGHCPLGPACP
CADAFLAP00000846
CCCH ZF
90
112
LVCKHFLKGLCKKGLKCEYLHEY
CADAFLAP00000846
CCCH ZF
115
141
RRMPECQSFSRSGYCPNGDDCLYQHVR
CADAFLAP00000846
CCCH ZF
145
164
RLPPCEHYDRGFCPLGPLCA
CADAFLAP00000846
CCCH ZF
169
191
RRRLCQYYLAGFCPEGKGCADAH
Links
Other
CCCH ZF
family RBPs
Other
Aspergillus flavus
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AO090005000813
Aspergillus oryzae
CADAORAG00002768
N
1.000
gw1.00129.565.1
Aspergillus carbonarius
gw1.00129.565.1
N
0.948
ATEG_01945
Aspergillus terreus
CADATEAG00008580
N
0.948
An01g05350
Aspergillus niger
CADANGAG00000527
N
0.940
NFIA_021820
Neosartorya fischeri
CADNFIAG00001277
N
0.922
ANIA_00298
Aspergillus nidulans
CADANIAG00002417
N
0.922
AFUA_1G02810
Aspergillus fumigatus
CADAFUAG00008733
N
0.914
Pc22g25210
Penicillium chrysogenum
Pc22g25210
N
0.905
ACLA_031620
Aspergillus clavatus
CADACLAG00003000
N
0.897
PMAA_051450
Penicillium marneffei
PMAA_051450
N
0.795
UREG_06760
Uncinocarpus reesii
UREG_06760
N
0.780
CIMG_04751
Coccidioides immitis
CIMG_04751
N
0.780
TRV_05203
Trichophyton verrucosum
TRV_05203
N
0.773
ARB_00210
Arthroderma benhamiae
ARB_00210
N
0.773
TERG_06924
Trichophyton rubrum
TERG_06924
N
0.773
TEQG_00763
Trichophyton equinum
TEQG_00763
N
0.773
MGYG_02843
Microsporum gypseum
MGYG_02843
N
0.773
CPSG_07754
Coccidioides posadasii
CPSG_07754
N
0.771
MCYG_05740
Microsporum canis
MCYG_05740
N
0.765
PABG_06223
Paracoccidioides brasiliensis
PABG_06223
N
0.752
BDBG_04496
Blastomyces dermatitidis
BDBG_04496
N
0.736
HCAG_04743
Histoplasma capsulatum
HCAG_04743
N
0.727
TESG_04667
Trichophyton tonsurans
TESG_04667
N
0.723