An01g05350 (Aspergillus niger)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CADANGAG00000527 T02051_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00000511 CCCH ZF 42 62
CADANGAP00000511 CCCH ZF 78 100
CADANGAP00000511 CCCH ZF 103 129
CADANGAP00000511 CCCH ZF 133 152
CADANGAP00000511 CCCH ZF 157 181

Links

Other CCCH ZF family RBPs
Other Aspergillus niger RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.00129.565.1 Aspergillus carbonarius gw1.00129.565.1 N 0.974
AFUA_1G02810 Aspergillus fumigatus CADAFUAG00008733 N 0.948
NFIA_021820 Neosartorya fischeri CADNFIAG00001277 N 0.948
Pc22g25210 Penicillium chrysogenum Pc22g25210 N 0.948
ATEG_01945 Aspergillus terreus CADATEAG00008580 N 0.948
AFLA_080640 Aspergillus flavus CADAFLAG00000846 N 0.940
AO090005000813 Aspergillus oryzae CADAORAG00002768 N 0.940
ACLA_031620 Aspergillus clavatus CADACLAG00003000 N 0.931
ANIA_00298 Aspergillus nidulans CADANIAG00002417 N 0.905
UREG_06760 Uncinocarpus reesii UREG_06760 N 0.775
PMAA_051450 Penicillium marneffei PMAA_051450 N 0.775
CIMG_04751 Coccidioides immitis CIMG_04751 N 0.767
ARB_00210 Arthroderma benhamiae ARB_00210 N 0.760
TRV_05203 Trichophyton verrucosum TRV_05203 N 0.760
TERG_06924 Trichophyton rubrum TERG_06924 N 0.760
TEQG_00763 Trichophyton equinum TEQG_00763 N 0.760
MGYG_02843 Microsporum gypseum MGYG_02843 N 0.760
PABG_06223 Paracoccidioides brasiliensis PABG_06223 N 0.756
MCYG_05740 Microsporum canis MCYG_05740 N 0.752
CPSG_07754 Coccidioides posadasii CPSG_07754 N 0.750
BDBG_04496 Blastomyces dermatitidis BDBG_04496 N 0.732
HCAG_04743 Histoplasma capsulatum HCAG_04743 N 0.724
TESG_04667 Trichophyton tonsurans TESG_04667 N 0.711