PABG_06223 (Paracoccidioides brasiliensis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PABG_06223 T01482_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PABG_06223T0 CCCH ZF 41 61
PABG_06223T0 CCCH ZF 84 108
PABG_06223T0 CCCH ZF 111 137
PABG_06223T0 CCCH ZF 141 165
PABG_06223T0 CCCH ZF 165 184

Links

Other CCCH ZF family RBPs
Other Paracoccidioides brasiliensis RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_04496 Blastomyces dermatitidis BDBG_04496 N 0.975
HCAG_04743 Histoplasma capsulatum HCAG_04743 N 0.949
CIMG_04751 Coccidioides immitis CIMG_04751 N 0.864
UREG_06760 Uncinocarpus reesii UREG_06760 N 0.864
CPSG_07754 Coccidioides posadasii CPSG_07754 N 0.856
PMAA_051450 Penicillium marneffei PMAA_051450 N 0.763
An01g05350 Aspergillus niger CADANGAG00000527 N 0.756
ATEG_01945 Aspergillus terreus CADATEAG00008580 N 0.756
AO090005000813 Aspergillus oryzae CADAORAG00002768 N 0.752
AFLA_080640 Aspergillus flavus CADAFLAG00000846 N 0.752
gw1.00129.565.1 Aspergillus carbonarius gw1.00129.565.1 N 0.748
NFIA_021820 Neosartorya fischeri CADNFIAG00001277 N 0.748
Pc22g25210 Penicillium chrysogenum Pc22g25210 N 0.748
AFUA_1G02810 Aspergillus fumigatus CADAFUAG00008733 N 0.740
TRV_05203 Trichophyton verrucosum TRV_05203 N 0.738
MGYG_02843 Microsporum gypseum MGYG_02843 N 0.738
TEQG_00763 Trichophyton equinum TEQG_00763 N 0.738
ARB_00210 Arthroderma benhamiae ARB_00210 N 0.738
TERG_06924 Trichophyton rubrum TERG_06924 N 0.738
ACLA_031620 Aspergillus clavatus CADACLAG00003000 N 0.732
MCYG_05740 Microsporum canis MCYG_05740 N 0.730
ANIA_00298 Aspergillus nidulans CADANIAG00002417 N 0.724