e_gw1.93.90.1 (Lottia gigantea)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		e_gw1.93.90.1 T07532_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.742
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.93.90.1 RRM 17 87
e_gw1.93.90.1 CCHC ZF 110 127

Links

Other CCHC ZF,RRM family RBPs
Other Lottia gigantea RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.000
Ame_R010198 Ailuropoda melanoleuca Ame_R010198 N 0.000
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.000
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.000
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.000
RBMS3 Bos taurus ENSBTAG00000044062 I 0.000
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.000
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.000
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.000
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.000
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.000
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.000
RBMS3 Canis familiaris ENSCAFG00000005464 N 0.000
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.000
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.000
RBMS2 Cavia porcellus ENSCPOG00000008256 I 0.000
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.000
RBMS3 Choloepus hoffmanni ENSCHOG00000000758 I 0.000
rbms1a Danio rerio ENSDARG00000074023 I 0.000
RBMS2 Danio rerio ENSDARG00000056150 I 0.000
RBMS1 Danio rerio ENSDARG00000057768 I 0.000
rbms3 Danio rerio ENSDARG00000044574 I 0.000
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.000
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.000
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.000
RBMS3 Echinops telfairi ENSETEG00000009485 I 0.000
RBMS1 Echinops telfairi ENSETEG00000012135 I 0.000
RBMS1 Equus caballus ENSECAG00000019894 I 0.000
RBMS2 Equus caballus ENSECAG00000013470 I 0.000
RBMS3 Erinaceus europaeus ENSEEUG00000014337 I 0.000
RBMS2 Felis catus ENSFCAG00000012028 I 0.000
O73664_CHICK Gallus gallus ENSGALG00000011132 I 0.000
RBMS1 Gasterosteus aculeatus ENSGACG00000015174 I 0.000
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.000
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.000
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.000
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.000
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.000
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.000
ENSGGOG00000011570 Gorilla gorilla ENSGGOG00000011570 I 0.000
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.000
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.000
RBMS3 Homo sapiens ENSG00000144642 D 0.000
RBMS2 Homo sapiens ENSG00000076067 I 0.000
RBMS1 Homo sapiens ENSG00000153250 D 0.000
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.000
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.000
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.000
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.000
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.000
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.000
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.000
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.000
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.000
RBMS1 Meleagris gallopavo ENSMGAG00000011054 I 0.000
RBMS1 Microcebus murinus ENSMICG00000008325 I 0.000
RBMS1 Monodelphis domestica ENSMODG00000005250 I 0.000
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.000
Rbms1 Mus musculus ENSMUSG00000026970 I 0.000
Rbms3 Mus musculus ENSMUSG00000039607 I 0.000
Rbms2 Mus musculus ENSMUSG00000040043 I 0.000
RBMS3 Myotis lucifugus ENSMLUG00000000659 I 0.000
RBMS2 Myotis lucifugus ENSMLUG00000000530 I 0.000
RBMS1 Ochotona princeps ENSOPRG00000012431 I 0.000
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.000
RBMS1 Ornithorhynchus anatinus ENSOANG00000006166 I 0.000
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.000
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.000
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.000
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.000
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.000
RBMS2 Oryzias latipes ENSORLG00000015426 I 0.000
RBMS1 Oryzias latipes ENSORLG00000003917 I 0.000
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.000
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.000
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.000
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.000
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.000
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.000
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.000
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.000
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.000
RBMS3 Procavia capensis ENSPCAG00000006307 I 0.000
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.000
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.000
RBMS3 Pteropus vampyrus ENSPVAG00000014037 I 0.000
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.000
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.000
D4A288_RAT Rattus norvegicus ENSRNOG00000023845 I 0.000
RBMS3 Sorex araneus ENSSARG00000000695 I 0.000
RBMS1 Sorex araneus ENSSARG00000011085 I 0.000
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.000
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.000
RBMS3 Sus scrofa ENSSSCG00000011222 I 0.000
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.000
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 0.000
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.000
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.000
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.000
RBMS1 Takifugu rubripes ENSTRUG00000017155 I 0.000
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.000
RBMS3 Tarsius syrichta ENSTSYG00000002615 I 0.000
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.000
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.000
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.000
RBMS2 Tetraodon nigroviridis ENSTNIG00000014563 I 0.000
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.000
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.000
RBMS1 Tetraodon nigroviridis ENSTNIG00000009477 I 0.000
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.000
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.000
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.000
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.000
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.000
RBMS2 Tursiops truncatus ENSTTRG00000002117 I 0.000
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.000
RBMS3 Vicugna pacos ENSVPAG00000003842 I 0.000
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.000
AAH43623 Xenopus laevis AAH43623 I 0.000
rbms1 Xenopus tropicalis ENSXETG00000016204 I 0.000
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.000