PGTG_12045 (Puccinia graminis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PGTG_12045 T08188_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_12045 CCHC ZF 197 214

Links

Other CCHC ZF family RBPs
Other Puccinia graminis RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017927 Ailuropoda melanoleuca Ame_R017927 I 0.000
PABPC5 Bos taurus ENSBTAG00000019942 I 0.000
Q95M35_CALJA Callithrix jacchus ENSCJAG00000003665 I 0.000
PABPC5 Cavia porcellus ENSCPOG00000002555 I 0.000
Pabpc5 Dipodomys ordii ENSDORG00000001035 I 0.000
PABPC4 Gallus gallus ENSGALG00000003800 I 0.000
PABPC5 Gorilla gorilla ENSGGOG00000007622 I 0.000
PABPC5 Homo sapiens ENSG00000174740 D 0.000
PABP5_MACMU Macaca mulatta ENSMMUG00000011562 I 0.000
PABPC5 Microcebus murinus ENSMICG00000009733 I 0.000
Pabpc5 Mus musculus ENSMUSG00000034732 I 0.000
ENSOANG00000010001 Ornithorhynchus anatinus ENSOANG00000010001 I 0.000
PABPC5 Oryctolagus cuniculus ENSOCUG00000010919 I 0.000
PABPC5 Otolemur garnettii ENSOGAG00000006882 I 0.000
PABP5_PANTR Pan troglodytes ENSPTRG00000022078 I 0.000
ENSPPYG00000020526 Pongo pygmaeus ENSPPYG00000020526 I 0.000
PABPC5 Pteropus vampyrus ENSPVAG00000006465 I 0.000
LOC100360473 Rattus norvegicus ENSRNOG00000003354 I 0.000
PABPC5 Sorex araneus ENSSARG00000014012 I 0.000
PABPC5 Tupaia belangeri ENSTBEG00000016482 I 0.000
PABPC5 Vicugna pacos ENSVPAG00000001063 I 0.000
AAH73435 Xenopus laevis AAH73435 I 0.000