CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_09789
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_09789
T08453_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_09789T0
CCHC ZF
281
298
GLCFRCGKQGHRSRECPD
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cucsa.378900
Cucumis sativus
Cucsa.378900
N
0.000
MDP0000319175
Malus x domestica
MDP0000319175
N
0.000
cassava15018.m1
Manihot esculenta
cassava15018.m1
N
0.000
Medtr7g124520
Medicago truncatula
Medtr7g124520
N
0.000
ppa020841m
Prunus persica
ppa020841m
N
0.000
30078.m002213
Ricinus communis
30078.m002213
N
0.000