LOC_Os02g18520 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os02g18520 T10894_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os02g18520.1 CCHC ZF 408 425

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

390 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002864508.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001450 N 0.000
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.000
ECT10 Arabidopsis thaliana AT5G58190-TAIR-G N 0.000
PK05579.1 Cannabis sativa PK05579.1 N 0.000
Cucsa.356240 Cucumis sativus Cucsa.356240 N 0.000
LjT10H22.120.nd Lotus japonicus LjT10H22.120.nd N 0.000
LjSGA_011466.1 Lotus japonicus LjSGA_011466.1 N 0.000
MDP0000199885 Malus x domestica MDP0000199885 N 0.000
MDP0000189157 Malus x domestica MDP0000189157 N 0.000
cassava16277.m1 Manihot esculenta cassava16277.m1 N 0.000
mgf019821m Mimulus guttatus mgf019821m N 0.000
PDK_20s1906441g001 Phoenix dactylifera PDK_20s1906441g001 N 0.000
PDK_20s1441394g001 Phoenix dactylifera PDK_20s1441394g001 N 0.000
B9N817_POPTR Populus trichocarpa POPTR_0018s14670 N 0.000
B9HBC4_POPTR Populus trichocarpa POPTR_0006s07970 N 0.000
ppa002677m Prunus persica ppa002677m N 0.000
29890.m000285 Ricinus communis 29890.m000285 N 0.000