LOC_Os07g12360 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g12360 T11742_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g12360.1 CCHC ZF 582 599

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s10040g3t1 Acyrtosiphon pisum DGIL_AUG5s10040g3t1 I 0.000
DGIL_AUG5s10626g1p1t1 Acyrtosiphon pisum DGIL_AUG5s10626g1p1t1 I 0.000
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.000
SNRNP70 Anolis carolinensis ENSACAG00000013276 I 0.000
AGAP006755 Anopheles gambiae AGAP006755 I 0.000
amel4_ncbi_hmm14979 Apis mellifera amel4_ncbi_hmm14979 I 0.000
BGIBMGA011988 Bombyx mori BGIBMGA011988 I 0.000
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.000
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.000
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.000
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.000
ENSCSAVG00000010109 Ciona savignyi ENSCSAVG00000010109 I 0.000
snrnp70 Danio rerio ENSDARG00000077126 I 0.000
NCBI_GNO_5600020 Daphnia pulex NCBI_GNO_5600020 I 0.000
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.000
GF14460 Drosophila ananassae FBgn0091487 I 0.000
GG23559 Drosophila erecta FBgn0115705 I 0.000
GH13577 Drosophila grimshawi FBgn0121053 I 0.000
snRNP70K Drosophila melanogaster FBgn0016978 D 0.000
GI24161 Drosophila mojavensis FBgn0146884 I 0.000
GA21298-RA Drosophila pseudoobscura FBgn0081286 I 0.000
GD22521 Drosophila simulans FBgn0193923 I 0.000
GJ21434 Drosophila virilis FBgn0208560 I 0.000
GK18098 Drosophila willistoni FBgn0220097 I 0.000
GE18384 Drosophila yakuba FBgn0235804 I 0.000
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.000
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.000
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.000
SNRNP70 Homo sapiens ENSG00000104852 D 0.000
ISCW021751 Ixodes scapularis ISCW021751 I 0.000
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.000
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.000
Minc09130 Meloidogyne incognita Minc09130 I 0.000
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.000
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.000
nasonia_NCBI_hmm246143 Nasonia vitripennis nasonia_NCBI_hmm246143 I 0.000
e_gw.153.81.1 Nematostella vectensis e_gw.153.81.1 I 0.000
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.000
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.000
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.000
PHUM022320 Pediculus humanus PHUM022320 I 0.000
EFA83976.1 Polysphondylium pallidum EFA83976.1 I 0.000
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.000
SNRNP70 Pteropus vampyrus ENSPVAG00000009578 I 0.000
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.000
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.000
XP_001193416.1 Strongylocentrotus purpuratus XP_001193416.1 I 0.000
XP_781203.2 Strongylocentrotus purpuratus XP_781203.2 I 0.000
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.000
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.000
snrnp70 Xenopus tropicalis ENSXETG00000022919 I 0.000