nasonia_NCBI_hmm246143 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm246143 T32180_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
snRNP70K
M134_0.6 		Drosophila melanogaster AUCAHG RNAcompete
Ray et al.(2013)
RNCMPT00143 		0.831
SNRNP70
M068_0.6 		Homo sapiens RWUCAAG RNAcompete
Ray et al.(2013)
RNCMPT00070 		0.831
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm246143 RRM 104 174

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm14979 Apis mellifera amel4_ncbi_hmm14979 I 0.986
PHUM022320 Pediculus humanus PHUM022320 I 0.944
DGIL_AUG5s10626g1p1t1 Acyrtosiphon pisum DGIL_AUG5s10626g1p1t1 I 0.915
ISCW021751 Ixodes scapularis ISCW021751 I 0.873
snrnp70 Danio rerio ENSDARG00000077126 I 0.859
DGIL_AUG5s10040g3t1 Acyrtosiphon pisum DGIL_AUG5s10040g3t1 I 0.859
NCBI_GNO_5600020 Daphnia pulex NCBI_GNO_5600020 I 0.845
SNRNP70 Anolis carolinensis ENSACAG00000013276 I 0.845
GI24161 Drosophila mojavensis FBgn0146884 I 0.845
snrnp70 Xenopus tropicalis ENSXETG00000022919 I 0.845
GG23559 Drosophila erecta FBgn0115705 I 0.831
GH13577 Drosophila grimshawi FBgn0121053 I 0.831
GF14460 Drosophila ananassae FBgn0091487 I 0.831
AGAP006755 Anopheles gambiae AGAP006755 I 0.831
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.831
GA21298-RA Drosophila pseudoobscura FBgn0081286 I 0.831
GE18384 Drosophila yakuba FBgn0235804 I 0.831
BGIBMGA011988 Bombyx mori BGIBMGA011988 I 0.831
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.831
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.831
GK18098 Drosophila willistoni FBgn0220097 I 0.831
GD22521 Drosophila simulans FBgn0193923 I 0.831
GJ21434 Drosophila virilis FBgn0208560 I 0.831
GM13669 Drosophila sechellia FBgn0168600 I 0.831
snRNP70K Drosophila melanogaster FBgn0016978 D 0.831
SNRNP70 Homo sapiens ENSG00000104852 D 0.831
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.831
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.831
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.831
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.831
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.831
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.831
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.831
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.831
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.831
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.831
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.831
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.831
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.831
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.831
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.831
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.831
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.831
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.817
e_gw.153.81.1 Nematostella vectensis e_gw.153.81.1 I 0.775
XP_001193416.1 Strongylocentrotus purpuratus XP_001193416.1 I 0.761
XP_781203.2 Strongylocentrotus purpuratus XP_781203.2 I 0.761
SNRNP70 Pteropus vampyrus ENSPVAG00000009578 I 0.746
P09406 Xenopus laevis P09406 I 0.744
CAA30972 Xenopus laevis CAA30972 I 0.744
AAI08448 Xenopus laevis AAI08448 I 0.744
AAH97714 Xenopus laevis AAH97714 I 0.744
AAH81025 Xenopus laevis AAH81025 I 0.744
113249 Helobdella robusta 113249 I 0.737
ENSCSAVG00000010109 Ciona savignyi ENSCSAVG00000010109 I 0.718
Minc09130 Meloidogyne incognita Minc09130 I 0.718
SNRNP70 Macropus eugenii ENSMEUG00000015650 I 0.714