KHDRBS1 (Equus caballus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSECAG00000019346 T18713_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		1.000
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		1.000
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.776
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.753
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000016975 KH 49 133

Links

Other KH family RBPs
Other Equus caballus RBPs

106 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R010681 Ailuropoda melanoleuca Ame_R010681 I 0.753
Ame_R010128 Ailuropoda melanoleuca Ame_R010128 I 1.000
KHDRBS2 Anolis carolinensis ENSACAG00000006691 I 0.776
KHDRBS3 Anolis carolinensis ENSACAG00000012042 I 0.753
KHDRBS1 Anolis carolinensis ENSACAG00000011693 I 0.988
KHDRBS2 Bos taurus ENSBTAG00000043990 I 0.776
A4FV24_BOVIN Bos taurus ENSBTAG00000002181 I 0.753
Q29RQ2_BOVIN Bos taurus ENSBTAG00000012497 I 1.000
LOC100399263 Callithrix jacchus ENSCJAG00000004331 I 0.753
ENSCJAG00000003689 Callithrix jacchus ENSCJAG00000003689 I 0.824
LOC100414412 Callithrix jacchus ENSCJAG00000006580 I 1.000
LOC100395662 Callithrix jacchus ENSCJAG00000001766 I 0.776
KHDRBS1 Canis familiaris ENSCAFG00000010777 I 1.000
KHDRBS2 Canis familiaris ENSCAFG00000002470 I 0.776
KHDRBS3 Canis familiaris ENSCAFG00000001166 I 0.753
KHDRBS2 Cavia porcellus ENSCPOG00000025621 I 0.776
KHDRBS3 Cavia porcellus ENSCPOG00000000342 I 0.753
KHDRBS1 Cavia porcellus ENSCPOG00000024148 I 1.000
ENSCHOG00000006973 Choloepus hoffmanni ENSCHOG00000006973 I 1.000
khdrbs2 Danio rerio ENSDARG00000069469 I 0.765
khdrbs1b Danio rerio ENSDARG00000070475 I 0.824
ENSDARG00000078082 Danio rerio ENSDARG00000078082 I 0.824
khdrbs1a Danio rerio ENSDARG00000052856 I 0.847
KHDRBS1 Dasypus novemcinctus ENSDNOG00000003761 I 0.847
KHDRBS2 Dasypus novemcinctus ENSDNOG00000014028 I 0.765
Khdrbs1 Dipodomys ordii ENSDORG00000011530 I 0.847
Khdrbs2 Dipodomys ordii ENSDORG00000005701 I 0.765
KHDRBS3 Echinops telfairi ENSETEG00000004701 I 0.753
LOC100058116 Equus caballus ENSECAG00000010194 I 0.741
LOC100056966 Equus caballus ENSECAG00000021541 I 0.776
KHDRBS2 Erinaceus europaeus ENSEEUG00000003986 I 0.776
KHDRBS1 Felis catus ENSFCAG00000006511 I 1.000
KHDRBS3 Gallus gallus ENSGALG00000016203 I 0.741
KHDR1_CHICK Gallus gallus ENSGALG00000003272 I 1.000
KHDRBS2 Gallus gallus ENSGALG00000016276 I 0.776
KHDRBS2 Gasterosteus aculeatus ENSGACG00000006097 I 0.741
KHDRBS3 Gasterosteus aculeatus ENSGACG00000008847 I 0.706
KHDRBS1 Gasterosteus aculeatus ENSGACG00000009219 I 0.847
KHDRBS1 Gorilla gorilla ENSGGOG00000008633 I 1.000
Q6J4Q8_9PRIM Gorilla gorilla ENSGGOG00000000940 I 0.753
KHDRBS2 Gorilla gorilla ENSGGOG00000025068 I 0.776
KHDRBS3 Homo sapiens ENSG00000131773 D 0.753
KHDRBS1 Homo sapiens ENSG00000121774 D 1.000
KHDRBS2 Homo sapiens ENSG00000112232 D 0.776
KHDRBS1 Loxodonta africana ENSLAFG00000009414 I 1.000
KHDRBS2 Loxodonta africana ENSLAFG00000006655 I 0.776
KHDRBS3 Loxodonta africana ENSLAFG00000004849 I 0.753
KHDRBS2 Macaca mulatta ENSMMUG00000003329 I 0.776
Q6J4Q6_MACMU Macaca mulatta ENSMMUG00000022248 I 0.765
KHDRBS1 Macaca mulatta ENSMMUG00000023438 I 1.000
KHDRBS1 Meleagris gallopavo ENSMGAG00000004455 I 1.000
KHDRBS3 Meleagris gallopavo ENSMGAG00000012888 I 0.741
KHDRBS2 Meleagris gallopavo ENSMGAG00000013877 I 0.776
KHDRBS1 Microcebus murinus ENSMICG00000001428 I 0.859
KHDRBS2 Monodelphis domestica ENSMODG00000018714 I 0.765
XM_001365874.1 Monodelphis domestica ENSMODG00000017551 I 1.000
KHDRBS3 Monodelphis domestica ENSMODG00000000975 I 0.753
Khdrbs3 Mus musculus ENSMUSG00000022332 I 0.753
Khdrbs2 Mus musculus ENSMUSG00000026058 I 0.765
Khdrbs1 Mus musculus ENSMUSG00000028790 D 1.000
KHDRBS1 Ochotona princeps ENSOPRG00000005131 I 1.000
KHDRBS3 Ochotona princeps ENSOPRG00000000404 I 0.741
KHDRBS1 Ornithorhynchus anatinus ENSOANG00000012357 I 1.000
KHDRBS3 Ornithorhynchus anatinus ENSOANG00000014074 I 0.753
KHDRBS2 Oryctolagus cuniculus ENSOCUG00000012344 I 0.776
KHDRBS1 Oryctolagus cuniculus ENSOCUG00000007654 I 1.000
KHDRBS3 Oryctolagus cuniculus ENSOCUG00000000743 I 0.741
KHDRBS1 Oryzias latipes ENSORLG00000020884 I 0.859
KHDRBS1 Oryzias latipes ENSORLG00000017156 I 0.800
KHDRBS3 Oryzias latipes ENSORLG00000013441 I 0.718
KHDRBS2 Oryzias latipes ENSORLG00000010165 I 0.776
KHDRBS3 Otolemur garnettii ENSOGAG00000005150 I 0.753
KHDRBS1 Pan troglodytes ENSPTRG00000000469 I 1.000
KHDRBS2 Pan troglodytes ENSPTRG00000018311 I 0.776
Q6J4Q9_PANTR Pan troglodytes ENSPTRG00000020608 I 0.753
ENSPPYG00000001605 Pongo pygmaeus ENSPPYG00000001605 I 1.000
KHDRBS1 Procavia capensis ENSPCAG00000009844 I 1.000
KHDRBS3 Pteropus vampyrus ENSPVAG00000017021 I 0.753
KHDRBS1 Pteropus vampyrus ENSPVAG00000013289 I 1.000
Khdrbs2 Rattus norvegicus ENSRNOG00000012284 I 0.776
KHDRBS1 Sorex araneus ENSSARG00000008479 I 0.965
KHDRBS3 Spermophilus tridecemlineatus ENSSTOG00000008710 I 0.741
KHDRBS1 Spermophilus tridecemlineatus ENSSTOG00000014138 I 1.000
KHDRBS2 Sus scrofa ENSSSCG00000001490 I 0.776
KHDRBS3 Sus scrofa ENSSSCG00000005941 I 0.753
KHDRBS3 Taeniopygia guttata ENSTGUG00000012611 I 0.741
KHDRBS2 Taeniopygia guttata ENSTGUG00000012786 I 0.776
KHDRBS1 Taeniopygia guttata ENSTGUG00000017346 I 0.976
KHDRBS1 Takifugu rubripes ENSTRUG00000012039 I 0.824
KHDRBS2 Takifugu rubripes ENSTRUG00000015760 I 0.765
KHDRBS3 Takifugu rubripes ENSTRUG00000013451 I 0.729
KHDRBS1 Takifugu rubripes ENSTRUG00000010001 I 0.847
KHDRBS1 Tarsius syrichta ENSTSYG00000004921 I 1.000
KHDRBS2 Tarsius syrichta ENSTSYG00000007203 I 0.776
KHDRBS3 Tetraodon nigroviridis ENSTNIG00000014021 I 0.718
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000013071 I 0.847
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000017471 I 0.812
KHDRBS1 Tupaia belangeri ENSTBEG00000016857 I 1.000
KHDRBS3 Tupaia belangeri ENSTBEG00000004773 I 0.753
KHDRBS3 Tursiops truncatus ENSTTRG00000001270 I 0.753
KHDRBS2 Tursiops truncatus ENSTTRG00000005591 I 0.776
KHDRBS1 Tursiops truncatus ENSTTRG00000009637 I 1.000
KHDRBS2 Vicugna pacos ENSVPAG00000001469 I 0.765
KHDRBS1 Vicugna pacos ENSVPAG00000006966 I 1.000
khdrbs1 Xenopus tropicalis ENSXETG00000005246 I 0.953
khdrbs3 Xenopus tropicalis ENSXETG00000009227 I 0.729