AGAP000965 (Anopheles gambiae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AGAP000965 T32458_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.829
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.750
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.750
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.750
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.750
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.750
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AGAP000965-PA RRM 29 99
AGAP000965-PA RRM 115 183
AGAP000965-PA RRM 257 327

Links

Other RRM family RBPs
Other Anopheles gambiae RBPs

141 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPIJ016143 Culex quinquefasciatus CPIJ016143 I 0.981
CpipJ_CPIJ016143 Culex pipiens CpipJ_CPIJ016143 I 0.981
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.915
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.915
GL26299 Drosophila persimilis FBgn0163881 I 0.853
Rbp9 Drosophila melanogaster FBgn0010263 D 0.848
GH13638 Drosophila grimshawi FBgn0121114 I 0.848
GM18380 Drosophila sechellia FBgn0173287 I 0.833
GG24901 Drosophila erecta FBgn0117030 I 0.833
GF14992 Drosophila ananassae FBgn0092017 I 0.833
GI11879 Drosophila mojavensis FBgn0134637 I 0.833
GJ13991 Drosophila virilis FBgn0201209 I 0.833
GA28809-RA Drosophila pseudoobscura FBgn0250168 I 0.833
GE18193 Drosophila yakuba FBgn0235624 I 0.833
GK14865 Drosophila willistoni FBgn0216870 I 0.833
CpipJ_CPIJ000395 Culex pipiens CpipJ_CPIJ000395 I 0.830
CPIJ000395 Culex quinquefasciatus CPIJ000395 I 0.830
fgenesh2_pg.C_sca_14000012 Lottia gigantea fgenesh2_pg.C_sca_14000012 I 0.810
fgenesh2_pg.scaffold_219000066 Branchiostoma floridae fgenesh2_pg.scaffold_219000066 I 0.807
fgenesh1_pg.C_scaffold_8000205 Daphnia pulex fgenesh1_pg.C_scaffold_8000205 I 0.807
estExt_Genewise1Plus.C_1660036 Capitella teleta estExt_Genewise1Plus.C_1660036 I 0.778
elavl2 Danio rerio ENSDARG00000040732 I 0.759
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.755
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.754
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.750
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.750
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.750
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.750
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.750
AAH94189 Xenopus laevis AAH94189 I 0.750
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.750
CBU92440 Xenopus laevis CBU92440 I 0.750
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.750
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.750
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.750
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.750
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.750
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.750
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.750
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.750
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.750
Elavl4 Mus musculus ENSMUSG00000028546 I 0.750
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.750
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.750
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.750
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.750
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.750
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.750
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.750
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.750
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.750
AAA96945 Xenopus laevis AAA96945 I 0.750
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.750
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.750
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.750
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.750
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.750
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.750
ELAVL4 Homo sapiens ENSG00000162374 D 0.750
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.750
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.750
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.750
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.750
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.750
Elavl2 Mus musculus ENSMUSG00000008489 I 0.750
ELAVL2 Homo sapiens ENSG00000107105 D 0.750
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.750
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.750
AAI70539 Xenopus laevis AAI70539 I 0.750
ELAVL2 Equus caballus ENSECAG00000020142 I 0.750
LOC100051268 Equus caballus ENSECAG00000022284 I 0.750
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.750
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.750
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.750
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.750
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.750
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.750
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.750
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.750
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.750
CBF67567 Xenopus laevis CBF67567 I 0.750
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.750
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.750
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.750
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.750
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.750
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.750
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.750
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.750
AAH99348 Xenopus laevis AAH99348 I 0.750
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.750
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.750
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.750
187316 Helobdella robusta 187316 N 0.749
elavl4 Danio rerio ENSDARG00000045639 I 0.748
Q91903 Xenopus laevis Q91903 I 0.746
CAA59430 Xenopus laevis CAA59430 I 0.746
AAA96943 Xenopus laevis AAA96943 I 0.746
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.746
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.745
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.745
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.745
elavl3 Danio rerio ENSDARG00000014420 I 0.745
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.741
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.741
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.741
Elavl3 Mus musculus ENSMUSG00000003410 I 0.741
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.741
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.741
ELAVL3 Homo sapiens ENSG00000196361 I 0.741
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.741
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.741
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.741
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.741
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.741
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.741
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.738
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.736
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.735
AAA96944 Xenopus laevis AAA96944 I 0.732
AAI69769 Xenopus laevis AAI69769 I 0.732
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.732
Q91584 Xenopus laevis Q91584 I 0.732
ENSCSAVG00000003440 Ciona savignyi ENSCSAVG00000003440 I 0.731
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.731
185541 Helobdella robusta 185541 I 0.730
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.729
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.728
LOAG_11702 Loa loa LOAG_11702 N 0.725
AGAP001883 Anopheles gambiae AGAP001883 N 0.718
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.717
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.717
Bm1_43995 Brugia malayi Bm1_43995 N 0.715
GG12756 Drosophila erecta FBgn0105043 N 0.712
GM19036 Drosophila sechellia FBgn0173939 N 0.712
GD16475 Drosophila simulans FBgn0188089 N 0.712
ISCW010302 Ixodes scapularis ISCW010302 N 0.711
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.708
AAEL008164 Aedes aegypti AAEL008164 N 0.705
CpipJ_CPIJ008385 Culex pipiens CpipJ_CPIJ008385 N 0.700
CPIJ008385 Culex quinquefasciatus CPIJ008385 N 0.700