Mex3d (Mus musculus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMUSG00000048696 T19138_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.844
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000057962 KH 41 100
ENSMUSP00000097079 KH 161 221
ENSMUSP00000097079 KH 256 315
ENSMUSP00000100987 KH 128 188
ENSMUSP00000100987 KH 223 282

Links

Other KH family RBPs
Other Mus musculus RBPs

151 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK11097.1 Cannabis sativa PK11097.1 N 0.000
Cucsa.151410 Cucumis sativus Cucsa.151410 N 0.000
Glyma19g45320.1 Glycine max Glyma19g45320.1 N 0.000
Glyma03g42540.1 Glycine max Glyma03g42540.1 N 0.000
chr1.CM0105.1300.nc Lotus japonicus chr1.CM0105.1300.nc N 0.000
MDP0000319338 Malus x domestica MDP0000319338 N 0.000
cassava38202.valid.m1 Manihot esculenta cassava38202.valid.m1 N 0.000
cassava38201.valid.m1 Manihot esculenta cassava38201.valid.m1 N 0.000
B9IJ52_POPTR Populus trichocarpa POPTR_0017s04020 N 0.000
B9HGC1_POPTR Populus trichocarpa POPTR_0007s00450 N 0.000
ppa005181m Prunus persica ppa005181m N 0.000
30042.m000490 Ricinus communis 30042.m000490 N 0.000
SB05G006890 Sorghum bicolor Sb05g006890 N 0.000