30042.m000490 (Ricinus communis)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		30042.m000490 T23546_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
30042.m000490 La 206 265
30042.m000490 RRM 296 335
30042.m000490 RRM 344 377

Links

Other La,RRM family RBPs
Other Ricinus communis RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9HGC1_POPTR Populus trichocarpa POPTR_0007s00450 N 0.912
cassava38201.valid.m1 Manihot esculenta cassava38201.valid.m1 N 0.894
B9IJ52_POPTR Populus trichocarpa POPTR_0017s04020 N 0.882
cassava38202.valid.m1 Manihot esculenta cassava38202.valid.m1 N 0.863
MDP0000319338 Malus x domestica MDP0000319338 N 0.836
PK11097.1 Cannabis sativa PK11097.1 N 0.830
Cucsa.151410 Cucumis sativus Cucsa.151410 N 0.820
ppa005181m Prunus persica ppa005181m N 0.807
chr1.CM0105.1300.nc Lotus japonicus chr1.CM0105.1300.nc N 0.799
Glyma19g45320.1 Glycine max Glyma19g45320.1 N 0.799
Glyma03g42540.1 Glycine max Glyma03g42540.1 N 0.791
GSVIVG00038251001 Vitis vinifera GSVIVG00038251001 N 0.757
XM_002881897.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002119 N 0.732
AT2G43970 Arabidopsis thaliana AT2G43970-TAIR-G N 0.723
SB05G006890 Sorghum bicolor Sb05g006890 N 0.711