ppa005181m (Prunus persica)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		ppa005181m T23715_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa005181m La 155 214
ppa005181m RRM 245 284
ppa005181m RRM 293 325

Links

Other La,RRM family RBPs
Other Prunus persica RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000319338 Malus x domestica MDP0000319338 N 0.895
PK11097.1 Cannabis sativa PK11097.1 N 0.858
Glyma19g45320.1 Glycine max Glyma19g45320.1 N 0.854
chr1.CM0105.1300.nc Lotus japonicus chr1.CM0105.1300.nc N 0.847
Glyma03g42540.1 Glycine max Glyma03g42540.1 N 0.833
B9HGC1_POPTR Populus trichocarpa POPTR_0007s00450 N 0.822
B9IJ52_POPTR Populus trichocarpa POPTR_0017s04020 N 0.822
30042.m000490 Ricinus communis 30042.m000490 N 0.807
GSVIVG00038251001 Vitis vinifera GSVIVG00038251001 N 0.807
Cucsa.151410 Cucumis sativus Cucsa.151410 N 0.803
cassava38201.valid.m1 Manihot esculenta cassava38201.valid.m1 N 0.780
XM_002881897.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002119 N 0.766
cassava38202.valid.m1 Manihot esculenta cassava38202.valid.m1 N 0.761
AT2G43970 Arabidopsis thaliana AT2G43970-TAIR-G N 0.748
SB05G006890 Sorghum bicolor Sb05g006890 N 0.706