PK11097.1 (Cannabis sativa)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		PK11097.1 T23282_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK11097.1 La 188 247
PK11097.1 RRM 278 318
PK11097.1 RRM 328 360

Links

Other La,RRM family RBPs
Other Cannabis sativa RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa005181m Prunus persica ppa005181m N 0.858
MDP0000319338 Malus x domestica MDP0000319338 N 0.836
30042.m000490 Ricinus communis 30042.m000490 N 0.830
Glyma19g45320.1 Glycine max Glyma19g45320.1 N 0.826
chr1.CM0105.1300.nc Lotus japonicus chr1.CM0105.1300.nc N 0.819
B9HGC1_POPTR Populus trichocarpa POPTR_0007s00450 N 0.816
Glyma03g42540.1 Glycine max Glyma03g42540.1 N 0.813
Cucsa.151410 Cucumis sativus Cucsa.151410 N 0.812
B9IJ52_POPTR Populus trichocarpa POPTR_0017s04020 N 0.809
cassava38201.valid.m1 Manihot esculenta cassava38201.valid.m1 N 0.801
GSVIVG00038251001 Vitis vinifera GSVIVG00038251001 N 0.794
cassava38202.valid.m1 Manihot esculenta cassava38202.valid.m1 N 0.777
AT2G43970 Arabidopsis thaliana AT2G43970-TAIR-G N 0.750
XM_002881897.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002119 N 0.732
SB05G006890 Sorghum bicolor Sb05g006890 N 0.706