CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GM23284
(
Drosophila sechellia
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0178151
T19952_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0204761
KH
81
146
TQTVFVPVNQYPKFNFIGKILGPKGNSLRRLQEETQCKIAIKGRGSMRDRNKEEQLRSTGDPRYAH
Links
Other
KH
family RBPs
Other
Drosophila sechellia
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R001967
Ailuropoda melanoleuca
Ame_R001967
N
0.000
PARP12
Canis familiaris
ENSCAFG00000003997
N
0.000
PARP12
Cavia porcellus
ENSCPOG00000011210
N
0.000
PARP12
Echinops telfairi
ENSETEG00000013423
N
0.000
PARP12
Erinaceus europaeus
ENSEEUG00000002654
N
0.000
PARP12
Gallus gallus
ENSGALG00000012788
N
0.000
ENSMGAG00000013110
Meleagris gallopavo
ENSMGAG00000013110
N
0.000
PARP12
Microcebus murinus
ENSMICG00000003163
N
0.000
ENSMODG00000013713
Monodelphis domestica
ENSMODG00000013713
N
0.000
Parp12
Mus musculus
ENSMUSG00000038507
N
0.000
D4A3V3_RAT
Rattus norvegicus
ENSRNOG00000008196
N
0.000
PARP12
Sorex araneus
ENSSARG00000012642
N
0.000
PARP12
Spermophilus tridecemlineatus
ENSSTOG00000004578
N
0.000
PARP12
Tarsius syrichta
ENSTSYG00000004008
N
0.000