CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GA17537-RA
(
Drosophila pseudoobscura
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0077548
T19812_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0278462
KH
85
147
QKVFVPVKQYPKFNFTGKILGPKGNSLRRLQEETQCKIAIKGRSSIRDRNKEEQLRNSGDPRY
Links
Other
KH
family RBPs
Other
Drosophila pseudoobscura
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GK20825
Drosophila willistoni
FBgn0222821
N
0.984
GE11681
Drosophila yakuba
FBgn0229475
N
0.953
GF13022
Drosophila ananassae
FBgn0090055
N
0.953
GJ19943
Drosophila virilis
FBgn0207085
N
0.953
GD25131
Drosophila simulans
FBgn0196443
N
0.953
qkr58E-3
Drosophila melanogaster
FBgn0022984
N
0.953
GG20697
Drosophila erecta
FBgn0112884
N
0.953
GM15642
Drosophila sechellia
FBgn0170560
N
0.953
GH20535
Drosophila grimshawi
FBgn0127998
N
0.953
GI18981
Drosophila mojavensis
FBgn0141720
N
0.938
GM15922
Drosophila sechellia
FBgn0170838
N
0.905
GD11683
Drosophila simulans
FBgn0183423
N
0.873
GM23298
Drosophila sechellia
FBgn0178165
N
0.848
GM23284
Drosophila sechellia
FBgn0178151
N
0.848
GD21670
Drosophila simulans
FBgn0193093
N
0.848
GM15865
Drosophila sechellia
FBgn0170781
N
0.841
CG4021
Drosophila melanogaster
FBgn0034659
N
0.825
CG3875
Drosophila melanogaster
FBgn0034740
N
0.797
GM15930
Drosophila sechellia
FBgn0170846
N
0.762
CG3927
Drosophila melanogaster
FBgn0034739
N
0.734