CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GM15922
(
Drosophila sechellia
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0170838
T19940_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0197399
KH
91
153
QKVFVPVNQFPKFNFAGKILGPKGNSLRRLQEESQCKIAIKGRSSIRDRNKEEQLRSSGDRRY
Links
Other
KH
family RBPs
Other
Drosophila sechellia
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GD11683
Drosophila simulans
FBgn0183423
N
0.968
GA17537-RA
Drosophila pseudoobscura
FBgn0077548
N
0.905
GE11681
Drosophila yakuba
FBgn0229475
N
0.891
GF13022
Drosophila ananassae
FBgn0090055
N
0.891
GM15642
Drosophila sechellia
FBgn0170560
N
0.891
GK20825
Drosophila willistoni
FBgn0222821
N
0.891
qkr58E-3
Drosophila melanogaster
FBgn0022984
N
0.891
GD25131
Drosophila simulans
FBgn0196443
N
0.891
GI18981
Drosophila mojavensis
FBgn0141720
N
0.875
GJ19943
Drosophila virilis
FBgn0207085
N
0.859
GG20697
Drosophila erecta
FBgn0112884
N
0.859
GH20535
Drosophila grimshawi
FBgn0127998
N
0.859
GM23298
Drosophila sechellia
FBgn0178165
N
0.833
GM23284
Drosophila sechellia
FBgn0178151
N
0.833
GD21670
Drosophila simulans
FBgn0193093
N
0.833
CG3875
Drosophila melanogaster
FBgn0034740
N
0.828
GM15930
Drosophila sechellia
FBgn0170846
N
0.825
CG4021
Drosophila melanogaster
FBgn0034659
N
0.825
GM15865
Drosophila sechellia
FBgn0170781
N
0.810
CG3927
Drosophila melanogaster
FBgn0034739
N
0.719