CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GG20697
(
Drosophila erecta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0112884
T19856_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0139243
KH
82
145
QKVFVPVKQYPKFNFTGKILGPKGNSLRRLQDETQCKIAIKGRSSIRDRNKEEQLRNTGDPRYA
Links
Other
KH
family RBPs
Other
Drosophila erecta
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
qkr58E-3
Drosophila melanogaster
FBgn0022984
N
0.969
GE11681
Drosophila yakuba
FBgn0229475
N
0.969
GD25131
Drosophila simulans
FBgn0196443
N
0.969
GJ19943
Drosophila virilis
FBgn0207085
N
0.969
GH20535
Drosophila grimshawi
FBgn0127998
N
0.969
GM15642
Drosophila sechellia
FBgn0170560
N
0.969
GK20825
Drosophila willistoni
FBgn0222821
N
0.969
GA17537-RA
Drosophila pseudoobscura
FBgn0077548
N
0.953
GI18981
Drosophila mojavensis
FBgn0141720
N
0.953
GF13022
Drosophila ananassae
FBgn0090055
N
0.938
GD21670
Drosophila simulans
FBgn0193093
N
0.864
GM23298
Drosophila sechellia
FBgn0178165
N
0.864
GM23284
Drosophila sechellia
FBgn0178151
N
0.864
GM15922
Drosophila sechellia
FBgn0170838
N
0.859
GD11683
Drosophila simulans
FBgn0183423
N
0.828
GM15865
Drosophila sechellia
FBgn0170781
N
0.812
CG4021
Drosophila melanogaster
FBgn0034659
N
0.797
CG3875
Drosophila melanogaster
FBgn0034740
N
0.781
GM15930
Drosophila sechellia
FBgn0170846
N
0.719
CG3927
Drosophila melanogaster
FBgn0034739
N
0.719