CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GJ19943
(
Drosophila virilis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0207085
T19999_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0234360
KH
82
145
QKVFVPVKQYPKFNFTGKILGPKGNSLRRLQDETQCKIAIKGRSSIRDRSKEEQLRNSGDPRYA
Links
Other
KH
family RBPs
Other
Drosophila virilis
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GH20535
Drosophila grimshawi
FBgn0127998
N
1.000
GK20825
Drosophila willistoni
FBgn0222821
N
0.969
GG20697
Drosophila erecta
FBgn0112884
N
0.969
GI18981
Drosophila mojavensis
FBgn0141720
N
0.969
GA17537-RA
Drosophila pseudoobscura
FBgn0077548
N
0.953
GE11681
Drosophila yakuba
FBgn0229475
N
0.938
GD25131
Drosophila simulans
FBgn0196443
N
0.938
qkr58E-3
Drosophila melanogaster
FBgn0022984
N
0.938
GM15642
Drosophila sechellia
FBgn0170560
N
0.938
GF13022
Drosophila ananassae
FBgn0090055
N
0.938
GM15922
Drosophila sechellia
FBgn0170838
N
0.859
GM23284
Drosophila sechellia
FBgn0178151
N
0.833
GM23298
Drosophila sechellia
FBgn0178165
N
0.833
GD21670
Drosophila simulans
FBgn0193093
N
0.833
GD11683
Drosophila simulans
FBgn0183423
N
0.828
GM15865
Drosophila sechellia
FBgn0170781
N
0.797
CG4021
Drosophila melanogaster
FBgn0034659
N
0.781
CG3875
Drosophila melanogaster
FBgn0034740
N
0.781
GM15930
Drosophila sechellia
FBgn0170846
N
0.719
CG3927
Drosophila melanogaster
FBgn0034739
N
0.719