CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GM23284
(
Drosophila sechellia
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0178151
T19952_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0204761
KH
81
146
TQTVFVPVNQYPKFNFIGKILGPKGNSLRRLQEETQCKIAIKGRGSMRDRNKEEQLRSTGDPRYAH
Links
Other
KH
family RBPs
Other
Drosophila sechellia
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GD21670
Drosophila simulans
FBgn0193093
N
1.000
GM23298
Drosophila sechellia
FBgn0178165
N
1.000
qkr58E-3
Drosophila melanogaster
FBgn0022984
N
0.894
GE11681
Drosophila yakuba
FBgn0229475
N
0.894
GM15642
Drosophila sechellia
FBgn0170560
N
0.894
GD25131
Drosophila simulans
FBgn0196443
N
0.894
GK20825
Drosophila willistoni
FBgn0222821
N
0.864
GG20697
Drosophila erecta
FBgn0112884
N
0.864
GF13022
Drosophila ananassae
FBgn0090055
N
0.864
GI18981
Drosophila mojavensis
FBgn0141720
N
0.848
GA17537-RA
Drosophila pseudoobscura
FBgn0077548
N
0.848
GM15922
Drosophila sechellia
FBgn0170838
N
0.833
GH20535
Drosophila grimshawi
FBgn0127998
N
0.833
GJ19943
Drosophila virilis
FBgn0207085
N
0.833
CG4021
Drosophila melanogaster
FBgn0034659
N
0.818
GM15865
Drosophila sechellia
FBgn0170781
N
0.803
GD11683
Drosophila simulans
FBgn0183423
N
0.803
CG3875
Drosophila melanogaster
FBgn0034740
N
0.788
CG3927
Drosophila melanogaster
FBgn0034739
N
0.727